G2882


Basic Information

Item Value
gene id G2882
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12549922 ~ 12550239 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4163
GTCCGATGCGCAGAGATGGACCCTTTTGGTCCAAGTCCATGCCGTGGCTAGAGGTTGGACAGAGGGATGAGCGGGAGGGGggtgagaacaaaaaaaaaagttccctCTCCTATATCCTCTGTTGCCGTTCTCTCTGCTCTTTTTGTAACAGTGGTTTTGACGAATGGTAGTTTGAAATAATGTGACTCTTCCGCTCCCTGTTGCGCCGTTGCAATTGTTCACTGGAGTGAGACTAAACGTTTTAGGTGGAAAAGAGACTCTGAAGGAAGCGTGAAACGATTATGGGGCAAAGTCAAGAAAGAGCCGCGCGCTGATGCc

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU4163 True 318 lncRNA 0.49 1 12549922 12550239

Neighbor

gene id symbol gene type direction distance location
zcchc7 LOC107709449,LOC107655886,LOC107548354 coding downstream 5781 12499771 ~ 12544141 (-)
adamtsl7 LOC107709448,LOC107750434,LOC107702297,LOC107570220 coding downstream 55597 12477518 ~ 12494325 (-)
LOC122342847 NA coding downstream 109477 12437822 ~ 12440445 (-)
LOC122342838 NA coding downstream 115024 12429730 ~ 12434898 (-)
ncapd3 ncapd3,LOC107655906,LOC107709432,LOC107750432,LOC107702392 coding downstream 130642 12407369 ~ 12419280 (-)
melk melk,LOC107709443,LOC107702285,LOC107570222 coding upstream 57527 12607766 ~ 12617282 (-)
LOC122348170 frmpd1,LOC107709451,LOC107655878,LOC107548301,LOC107750435,LOC107702397,LOC107570223 coding upstream 68244 12618483 ~ 12643576 (-)
chrna8 LOC107709454,LOC107655813,LOC107548356,LOC107562618,LOC107702399,LOC108410819 coding upstream 174335 12724574 ~ 12772830 (-)
chrnb3a chrnb3a,LOC107562617,LOC107655822,LOC107548357,LOC107709455,LOC107702298,LOC107750476 coding upstream 228350 12778589 ~ 12794404 (-)
chrna6 chrna6,LOC107709456,LOC107655806,LOC107750436,LOC108260984,LOC108412407 coding upstream 266516 12816755 ~ 12823474 (-)
G2842 NA non-coding downstream 94350 12455354 ~ 12455572 (-)
G2841 NA non-coding downstream 95153 12454231 ~ 12454769 (-)
LOC122348535 ncapd3,LOC107709432,LOC107702392,LOC107750432,LOC107655906,LOC107591581 non-coding downstream 106039 12427167 ~ 12443883 (-)
G2837 NA non-coding downstream 107479 12426213 ~ 12442443 (-)
G2839 NA non-coding downstream 108425 12435917 ~ 12441497 (-)
G2889 NA non-coding upstream 42202 12592441 ~ 12595294 (-)
G2891 NA non-coding upstream 67529 12617768 ~ 12618042 (-)
G3020 NA non-coding upstream 336537 12886776 ~ 12887653 (-)
G3070 NA non-coding upstream 655548 13205787 ~ 13206826 (-)
G3074 NA non-coding upstream 744458 13294697 ~ 13295015 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 183814 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 432539 12097910 ~ 12117383 (-)
apela NA other downstream 761256 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 969205 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 1037089 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 353960 12904199 ~ 12926482 (-)
smim18 NA other upstream 418854 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 604247 13154486 ~ 13159444 (-)
G3072 NA other upstream 741057 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 1279224 13829463 ~ 13842664 (-)

Expression


Co-expression Network