G2918


Basic Information

Item Value
gene id G2918
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12794867 ~ 12873669 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4201
tttttttttttttttttttttttAGCCAATTACCCTTCtcggttttgtttattttgaacatatGCCTCCAAGCTTATGAGTTCACATTAAAGTTCTGCTAACTGTTGCCCCCCCCTTCCCCAATCAAAAAAAAGTGCCCAAAAATATTAGAACTAGAACTAAATGAggtacatcaaaaaaaaaaaaaagctaaaaataaatactgatgttAACAAAGAGCATAGTagtttaagtaaataaatagtggaaataaatgagaaatgacATTAATTCACAGTCAGACAGGCAGGCAGTTTGTGTAGCATGTATCAAGGCATGGTATAGGTTTAGAATCTGTGCTCTGTATTAGTTAGTGCATGAAGGGTTTTCCGAAACTGCTCATGGTTCTGGTCAAGTGGTCTGGCTCCTCTCAGGCTTTGGAGAGAGCCACGGCGGAGAAACGCACCTCCCCTTTCTCTCGCTCCATAAACTCACGGCACACCCTCGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4201 True 489 lncRNA 0.39 2 12794867 12873669

Neighbor

gene id symbol gene type direction distance location
pax5 pax5,LOC107702396 coding upstream 203977 12549928 ~ 12590890 (+)
LOC122342830 NA coding upstream 462965 12328136 ~ 12331902 (+)
LOC122351007 NA coding upstream 472409 12318615 ~ 12322458 (+)
med28 med28,LOC107702388,LOC107656902 coding upstream 482352 12310519 ~ 12312515 (+)
spock3 spock3,LOC107702382 coding upstream 638289 12130310 ~ 12156578 (+)
anxa5b anxa5b,LOC107709458,LOC107671923,LOC107548361,LOC107702401 coding downstream 7450 12881119 ~ 12887654 (+)
zmynd10 zmynd10,LOC107702405 coding downstream 25957 12899626 ~ 12905289 (+)
gtf2e2 gtf2e2,LOC107671915,LOC107548363,LOC107750445,LOC107702408 coding downstream 93096 12966765 ~ 12977670 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding downstream 212180 13085849 ~ 13123735 (+)
lias lias coding downstream 267910 13141579 ~ 13147369 (+)
G2847 NA non-coding upstream 296998 12497641 ~ 12497869 (+)
G2821 NA non-coding upstream 354759 12439732 ~ 12440108 (+)
G2820 NA non-coding upstream 357609 12426545 ~ 12437258 (+)
G2791 NA non-coding upstream 399138 12392610 ~ 12395729 (+)
G2806 NA non-coding upstream 402673 12390112 ~ 12392194 (+)
G2948 NA non-coding downstream 62908 12936577 ~ 12937470 (+)
G2967 NA non-coding downstream 149759 13023428 ~ 13155797 (+)
G2981 NA non-coding downstream 250203 13123872 ~ 13124595 (+)
G2995 pds5a,LOC107700294,LOC107757607 non-coding downstream 296418 13170087 ~ 13171933 (+)
LOC122348541 NA non-coding downstream 420448 13294117 ~ 13295055 (+)
dnah6 dnah6,LOC106610484 other upstream 70409 12659262 ~ 12724458 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other upstream 136360 12644679 ~ 12658507 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 950807 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 1011797 11773956 ~ 11783070 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 1069967 11711940 ~ 11724900 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 329390 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 642539 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 1240762 14114431 ~ 14118433 (+)
LOC122345399 NA other downstream 1606529 14480198 ~ 14481346 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other downstream 1728643 14602312 ~ 14603888 (+)

Expression


Co-expression Network