G3070


Basic Information

Item Value
gene id G3070
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13205787 ~ 13206826 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4410
ttttattaaaacaactatttaaGAGACTTCATAAGACTATGAAATCATTTCTTAAGAATAAGCACTTCATAACTGAAATCCTCATTTTAGCTTTAAGCGCCATAAACAACATATCACAAAAAGCGTTGTCAGCAATACTTAACCAACGTGATTTAATCGTCGTTAAGAAGGTGATCTCAGTGTGACATTATGGTGCGGATTCTTATTTTACATGAACACAGCTGTAGGAGAGGAACCAGCAGACCGAGAGTGTTTTCAGAGTCTTTTTGATTCATAAGAAtgaaatttaaaactttaacttgAAGAACTACgatctaaaaatgtacattttgcaaCACATGTAGCAGTGCAACAAAAGATACAAGTCTTTTGAAAGATATGTTTGACTTGTAAAATCCTGCAATCGAtaattataaaatcataaaatgaacACGGACTCGGctgtttaatgaataaatggcCCCAGTTTATAATAGGCGGTcctaactactatgtacttacattaaaataagtatCGTGTTTATATCGTATTGTAAAACACTTGCTGTTATTGAGGTGAGATGCAGGTAAGCTTAGTGACAGGTTCGGTGGTGTGGTTAAggttaagggtgggttaaggtgtaagggatggacagcgtaacagtgtaattatacagaaattaattacaggtGTAATCacatgcaggtatttttaaaaacatgcacgtacacaataagtgcactgcatcaaatgattcatttacaagtacatagtagttaagctCAGCTAATATAACCTGTTAGCGTTCCAACACACCACCCGTGGCGCATTTTGTGCTTAGTTTACATTTTCCAGAAATGCTAAGGGGATAAAGCGGGACCGAATAAATACCTGATCAATGTCTGTAACGTGTCTAATACATAGTCAGAACTAGCAGACAGTATAACAGTTAAGTAAACCATTTTTAGACATCAGTGTTGAGAAGTCTTTGTTGAGGCTTCAAATACTTGGTTTCGTGAGAGAAACAATTCTGTCTTAGTGATGAGAATTAACACCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4410 True 1040 lncRNA 0.42 1 13205787 13206826

Neighbor

gene id symbol gene type direction distance location
pds5a pds5a,LOC107757607,LOC107700294 coding downstream 16025 13168159 ~ 13189762 (-)
ugdh ugdh,LOC107757604,LOC107700292 coding downstream 51763 13147444 ~ 13154024 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding downstream 64443 13137427 ~ 13141344 (-)
rfc1 rfc1,LOC107709439,LOC107700290,LOC107757601 coding downstream 69373 13123871 ~ 13136414 (-)
adgrl3.1 adgrl3.1,LOC107709467,LOC107671918,LOC107702411 coding downstream 121284 12993244 ~ 13084503 (-)
trnar-ucg NA coding upstream 11568 13218394 ~ 13218468 (-)
trnar-ucg_1 NA coding upstream 12470 13219296 ~ 13219368 (-)
trnae-cuc NA coding upstream 13974 13220800 ~ 13220873 (-)
trnar-ucu NA coding upstream 14756 13221582 ~ 13221654 (-)
trnar-ucg_2 NA coding upstream 15725 13222551 ~ 13222623 (-)
G3020 NA non-coding downstream 318134 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 587745 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 610493 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 655548 12549922 ~ 12550239 (-)
G2842 NA non-coding downstream 750215 12455354 ~ 12455572 (-)
G3074 NA non-coding upstream 87871 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 95927 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 181608 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 182427 13389253 ~ 13389325 (-)
G3093 NA non-coding upstream 183249 13390075 ~ 13390345 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 46343 13154486 ~ 13159444 (-)
smim18 NA other downstream 232775 12969093 ~ 12973012 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 279305 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 839679 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 1088404 12097910 ~ 12117383 (-)
G3072 NA other upstream 84470 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 622637 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 675067 13881893 ~ 13895284 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 1454648 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 1479770 14686596 ~ 14714546 (-)

Expression


Co-expression Network