G3072


Basic Information

Item Value
gene id G3072
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13291296 ~ 13291723 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4412
ccagacgatccaacggtagctactcggatctcgggttgcctggcggacatctcgacatggatgcaagagtaccatctacagctcaacctgacaaagactgagctgcttgtattccctgccactccaactacacagcatgacttcaccatccagctaggttcttcgtcaattaccccatcaacctcagtcagaaatcttggtgtaatcctcgatgaccaactaaccttcaaagatcacattgcaaagactgctcgatcctgcaggtttgcactacacaacatcagaaagatcaggccctttctaacagagcaagctgcgcagctacttgtccaggcccttgtcatttctagactggactactgcaatgctcttctggctggacttccatcgaacacaataaaacctctacaaatgattcagaatgcagc

Function

GO:

id name namespace
GO:0007034 vacuolar transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4412 True 428 TUCP 0.48 1 13291296 13291723

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_67 NA coding downstream 956 13290268 ~ 13290340 (-)
trnar-ucg_66 NA coding downstream 1273 13289951 ~ 13290023 (-)
trnar-ccg_13 NA coding downstream 1865 13289359 ~ 13289431 (-)
trnar-ucg_65 NA coding downstream 2696 13288528 ~ 13288600 (-)
trnar-ucg_64 NA coding downstream 3014 13288210 ~ 13288282 (-)
fam184b fam184b,LOC107742663,LOC107757610,LOC107700297,LOC107695781 coding upstream 107118 13398841 ~ 13422240 (-)
lcorl lcorl,LOC107695657,LOC107569620,LOC107724149,LOC107700260,LOC107700300,LOC107695668,LOC107724150 coding upstream 142494 13434217 ~ 13451163 (-)
lrba lrba,LOC107695599,LOC107745856,LOC107598261 coding upstream 296658 13588381 ~ 13781738 (-)
sh3d19 sh3d19,LOC107695906,LOC107745872 coding upstream 498852 13790575 ~ 13808268 (-)
LOC122350613 dctpp1,LOC107695562 coding upstream 821610 14113333 ~ 14114156 (-)
G3070 NA non-coding downstream 84470 13205787 ~ 13206826 (-)
G3020 NA non-coding downstream 403643 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 673254 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 696002 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 741057 12549922 ~ 12550239 (-)
G3074 NA non-coding upstream 2974 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 11030 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 96711 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 97530 13389253 ~ 13389325 (-)
G3093 NA non-coding upstream 98352 13390075 ~ 13390345 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 131852 13154486 ~ 13159444 (-)
smim18 NA other downstream 318284 12969093 ~ 12973012 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 364814 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 925188 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 1173913 12097910 ~ 12117383 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 537740 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 590170 13881893 ~ 13895284 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 1369751 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 1394873 14686596 ~ 14714546 (-)
G3491 gpank1 other upstream 1455106 14746829 ~ 14748975 (-)

Expression


Co-expression Network