G3077


Basic Information

Item Value
gene id G3077
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13300119 ~ 13305686 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4417
AAGGAGGGCCACTTTAAGGGCTTCCGTGCTTTcttaaagactgaagaaatccctttcttcatccttttcctcaaaccggggtgtttttctaaaaatcattcaaaaagactgaatcatttgcatatgccagtgcactgtgctggtatttactatctacacaaatgtcccaggttttactgtactttcgtTCTTACCTGTGCTGTTCTCCACAGAAGGCGCCTCTCCGTCACTCGGCTCCTTCAGGCTCATGGAAGACTCTGTTGCGTACGTGTTCTCACGATCAGAACATGCGCACTCTTCTCTAGCAGGGCCACTCTGCCGAGACCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4417 True 329 lncRNA 0.37 2 13300119 13305686

Neighbor

gene id symbol gene type direction distance location
chrna9a LOC107660492,LOC107757584,LOC107700259,LOC107548308 coding upstream 83423 13210594 ~ 13216696 (+)
n4bp2 n4bp2,LOC107700258,LOC107598270 coding upstream 98583 13190665 ~ 13201536 (+)
ube2kb ube2kb,LOC100708886,LOC108261162,LOC105026169,LOC107088242,LOC102229303 coding upstream 132520 13161823 ~ 13167599 (+)
lias lias coding upstream 152750 13141579 ~ 13147369 (+)
si:dkey-92j12.5 LOC107757600,LOC107709437,LOC107709438,LOC107548306 coding upstream 176384 13085849 ~ 13123735 (+)
haspin LOC107695683,LOC108416162,LOC107722281,LOC107580791 coding downstream 84416 13390102 ~ 13398726 (+)
ncapg ncapg,LOC107700299,LOC107757563 coding downstream 117346 13423032 ~ 13434220 (+)
mab21l2 mab21l2,LOC107700304 coding downstream 351168 13656854 ~ 13659110 (+)
rps3a rps3a,LOC107695588 coding downstream 478129 13783815 ~ 13786613 (+)
fhip1aa fam160a1,fam160a1a,LOC107745858,LOC107695572,LOC107700307,LOC107757618,LOC107598295 coding downstream 504007 13809693 ~ 13827382 (+)
LOC122334852 NA non-coding upstream 58 13296872 ~ 13300061 (+)
LOC122348541 NA non-coding upstream 5064 13294117 ~ 13295055 (+)
G2995 pds5a,LOC107700294,LOC107757607 non-coding upstream 128186 13170087 ~ 13171933 (+)
G2967 NA non-coding upstream 144322 13023428 ~ 13155797 (+)
G2981 NA non-coding upstream 175524 13123872 ~ 13124595 (+)
LOC122351005 NA non-coding downstream 6408 13312094 ~ 13315805 (+)
LOC122351401 NA non-coding downstream 54016 13359702 ~ 13362727 (+)
LOC122335725 NA non-coding downstream 58416 13364102 ~ 13368029 (+)
LOC122351590 NA non-coding downstream 64492 13370178 ~ 13373235 (+)
LOC122351052 NA non-coding downstream 74882 13380568 ~ 13384220 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other upstream 94403 13203059 ~ 13205716 (+)
dnah6 dnah6,LOC106610484 other upstream 575661 12659262 ~ 12724458 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other upstream 641612 12644679 ~ 12658507 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other upstream 1456059 11837606 ~ 11844060 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other upstream 1517049 11773956 ~ 11783070 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 210522 13516208 ~ 13585981 (+)
G3187 gatb,LOC107695556,LOC107695902 other downstream 808745 14114431 ~ 14118433 (+)
LOC122345399 NA other downstream 1174512 14480198 ~ 14481346 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other downstream 1296626 14602312 ~ 14603888 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other downstream 1304558 14610244 ~ 14612677 (+)

Expression


Co-expression Network