G3080


Basic Information

Item Value
gene id G3080
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 13302753 ~ 13313529 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4420
AAAGAAACGCTAAATCATCCCCAAAGAACCGaacccataaccaaacaacataaatagacaactaaatacaattaataaaatcagcaacttttccttttcaaattgtaaaaaaaaagaaaggttcagagagcattagatgtgatttttcacacatggattGGCCACCGCAGAGTCCATACTTCAACTCCGATGAGAATCTTTGGGATGTACTCTAGAAGACTATGTGAACAGTTCAACTCTCCCGTCATCAATATATAATCTTGgcgaaaaatgtatgcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4420 True 281 lncRNA 0.43 2 13302753 13313529

Neighbor

gene id symbol gene type direction distance location
trnar-ucg_67 NA coding downstream 12413 13290268 ~ 13290340 (-)
trnar-ucg_66 NA coding downstream 12730 13289951 ~ 13290023 (-)
trnar-ccg_13 NA coding downstream 13322 13289359 ~ 13289431 (-)
trnar-ucg_65 NA coding downstream 14153 13288528 ~ 13288600 (-)
trnar-ucg_64 NA coding downstream 14471 13288210 ~ 13288282 (-)
fam184b fam184b,LOC107742663,LOC107757610,LOC107700297,LOC107695781 coding upstream 85312 13398841 ~ 13422240 (-)
lcorl lcorl,LOC107695657,LOC107569620,LOC107724149,LOC107700260,LOC107700300,LOC107695668,LOC107724150 coding upstream 120688 13434217 ~ 13451163 (-)
lrba lrba,LOC107695599,LOC107745856,LOC107598261 coding upstream 274852 13588381 ~ 13781738 (-)
sh3d19 sh3d19,LOC107695906,LOC107745872 coding upstream 477046 13790575 ~ 13808268 (-)
LOC122350613 dctpp1,LOC107695562 coding upstream 799804 14113333 ~ 14114156 (-)
G3074 NA non-coding downstream 7738 13294697 ~ 13295015 (-)
G3070 NA non-coding downstream 95927 13205787 ~ 13206826 (-)
G3020 NA non-coding downstream 415100 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 684711 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 707459 12592441 ~ 12595294 (-)
trnar-ucg_68 NA non-coding upstream 74905 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 75724 13389253 ~ 13389325 (-)
G3093 NA non-coding upstream 76546 13390075 ~ 13390345 (-)
G3094 NA non-coding upstream 77536 13391065 ~ 13391301 (-)
G3095 NA non-coding upstream 78026 13391555 ~ 13391885 (-)
G3072 NA other downstream 11030 13291296 ~ 13291723 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 143309 13154486 ~ 13159444 (-)
smim18 NA other downstream 329741 12969093 ~ 12973012 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 376271 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 936645 12337962 ~ 12366108 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 515934 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 568364 13881893 ~ 13895284 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 1347945 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 1373067 14686596 ~ 14714546 (-)
G3491 gpank1 other upstream 1433300 14746829 ~ 14748975 (-)

Expression


Co-expression Network