G3318


Basic Information

Item Value
gene id G3318
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14490724 ~ 14491638 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4745
TGAAACATTACCATAGttgaaatcagtttttaatgcttttcattATTACTACCATTAATAGCTGTACATGTTTTTCTTTACGCTCATAATAAGTGTTAAACCACAGTTTATAGGTAGCCTATACACTAAAACCCACGAAGCATTAGCATTACAAATCTAAAGGCCTTctgatgtttattcatgtttattttataagaaatgATTGGTTCACCTGCCGCTTGAACTGAGGTGCTGCAGCAAGCTGTCATGACAAATTAAAGAGCCAAAAAACAGTATTTGTTGTCTGGCAATAGTGGCAACAGTTCAACTCTCAGACTTTTGCTTAATTACTGTCATGTATTTTCACTACATGAGAACATGACGCGTTGCATAAAAGTGCCGTAGTGTTTGTGAGAGGTGTTTTAGAGTGCTTGCTGGCTCAGGTTCGGAGAtgaaatcataaacatcttCCTTACAGTGGAAAATCTCAGGAGTATGTGCTTGACTGCACTTTTTTCGTTTCACTTTTCTTGGCAGTAGAATCTGGTCAAATAGATTCAAATAgttctataataaatatataatatataattaataaatgcacaattacCAAACTAAAATGACATACTCAAAATTTTTATGAGCGTTTTTCTCATTTTGCAGAGACAGTAAATTGAATATAAAAGCACAAACTGCCAATCTGGGACATTTAACAAAGTGGAAAACAAACTGCAGTGGtcgcaccacatgacattttgacattttgtcaaAATTTACAAGCACAGAACTGGCATCTAAAAGAATACAAGCTAGATTCCCATAGAGGTCAGTAGAAAACTGTGTGTGTAAACGTGTTTAAGGATACACAAACATGAAGCTTGGTGCATACCTTGTTGTTATTTAGATTGATAGATTTTGAGATTTTGTCTTTAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4745 True 915 lncRNA 0.30 1 14490724 14491638

Neighbor

gene id symbol gene type direction distance location
trim2a trim2,trim2a,LOC107695527,LOC107745864,LOC108434330 coding downstream 11847 14459795 ~ 14478877 (-)
tmem154 NA coding downstream 79154 14402409 ~ 14411570 (-)
fbxw7 fbxw7,LOC107745860 coding downstream 89575 14270253 ~ 14401149 (-)
LOC122350613 dctpp1,LOC107695562 coding downstream 376568 14113333 ~ 14114156 (-)
sh3d19 sh3d19,LOC107695906,LOC107745872 coding downstream 682456 13790575 ~ 13808268 (-)
fhdc1 fhdc1,LOC107745865,LOC107695508,LOC107757620,LOC107700311,LOC107598289 coding upstream 8580 14500218 ~ 14520958 (-)
arfip1 arfip1,LOC107745866,LOC107695488,LOC107700312 coding upstream 30651 14522289 ~ 14530568 (-)
sfrp2 sfrp2,LOC107745867,LOC107695500,LOC107757589,LOC107700275 coding upstream 45092 14536730 ~ 14540446 (-)
dchs2 dchs2 coding upstream 63233 14554871 ~ 14582221 (-)
fgg fgg,LOC107572199,LOC107714655,LOC107695473,LOC107700315,LOC107757622 coding upstream 100577 14592215 ~ 14596486 (-)
G3266 NA non-coding downstream 77749 14412767 ~ 14412975 (-)
LOC122351408 NA non-coding downstream 222939 14249605 ~ 14267785 (-)
G3232 NA non-coding downstream 521944 13961708 ~ 13968780 (-)
G3230 NA non-coding downstream 563663 13924275 ~ 13927061 (-)
G3222 NA non-coding downstream 612409 13825494 ~ 13878315 (-)
G3357 NA non-coding upstream 118859 14610497 ~ 14610786 (-)
G3475 gucy1a3,LOC107700279,LOC107695445,LOC107572203,LOC107598251 non-coding upstream 144056 14635694 ~ 14636587 (-)
LOC122351313 NA non-coding upstream 242740 14734378 ~ 14736414 (-)
LOC122353106 NA non-coding upstream 250470 14742108 ~ 14742636 (-)
G3493 NA non-coding upstream 257749 14749387 ~ 14750174 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other downstream 595440 13881893 ~ 13895284 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other downstream 648060 13829463 ~ 13842664 (-)
G3072 NA other downstream 1199001 13291296 ~ 13291723 (-)
smim14 smim14,LOC107757606,LOC107700293 other downstream 1331280 13154486 ~ 13159444 (-)
smim18 NA other downstream 1517712 12969093 ~ 12973012 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other upstream 169836 14661474 ~ 14687860 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other upstream 194958 14686596 ~ 14714546 (-)
G3491 gpank1 other upstream 255191 14746829 ~ 14748975 (-)
cxxc4 cxxc4,LOC107695705 other upstream 406563 14898201 ~ 14918786 (-)
G3522 NA other upstream 433447 14925085 ~ 14925363 (-)

Expression


Co-expression Network