G319


Basic Information

Item Value
gene id G319
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1931816 ~ 1933144 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU478
cacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacacgcacacacacacacacacacatacacacacacagacacacacacactcacacaatatTCTTCTAAGCTGCTCAGGTGATGAATGTAGGTTATAAAAGGATTGTGGGAACTCTGTTAAAAACCCAGTTTCTTCTTGTGATCAGAACGCTGCTTACATTTttacacctaaaataaaacgtttattCTTTTAACTTCTATAAACGTTAGAGGAGCAGTTTCTTTGATCAGAGCGTTACTCAAAGGATCCTGACCTGTTTCTTACAGTCTTCTACTCCATGcattttcaccccaaaataacattatttacattttattacaacatACTTTAAACGTTGCTTAAGGATGTCAACGTTTCTAGAgcttataaaagaaaaaacgaacaaaaaggAGCGGTCTGTCACCGCTAGAAACCAATgaatattctttaatatttaggCGAACATCCAACATCCCTGAGAGATCACAACCATTTCAGACTGTTATTAAAAACCAGACAACGTTGAATTAACATCCTATTAATGTTACTGAAAGAACACTTGCTTCTTAAGATTGCAACGTAACTATAATCTGTCTATTTTAGGTTTCCCTCTTTGGTTTTTTTGCATAACAAGCGCATTATAAATACGCTGAACGTAGATCTTTGGGTTATGctcttaatattaataaaaacgcTGTATGCGtgagttttagttttttcttctttttggacAGAAAGCACCTGTCGAAGCAAACGTTATCGCTTGCATTTAATCTCTTCTCCGACGTTCACCCGTgtctatttttgtaaatgtgacGTTTCTGGGGAAATAGTAAGGATTCTCATTTCTagactgtttaaaagtttgctgACTTTCAGCCGGCTCTCTCACGGTGTTAGTCGTGGACGCGCAGTGTGTGTTCTTCAAGGAGCGAGCGGCCGATAGCATCCGTGAAGAGCGGCCGAAGACGTCGATCTGTTAAACGCCGCTCCTCGATCTCGAGCTTAAGCTTCGTCTCTTCCCGCAGACGATCCCCACGAGTGCCGCGGAGACGAGGAGGAAGGTGCACACCAGAGCCGTCGCCATGGCGCCGCGGCCGTTCCCGCCGGA

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042612 MHC class I protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478 True 1220 lncRNA 0.39 3 1931816 1933144

Neighbor

gene id symbol gene type direction distance location
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding upstream 38620 1712042 ~ 1893196 (+)
LOC122343461 NA coding upstream 339886 1584612 ~ 1591930 (+)
LOC122347221 LOC107751081,LOC107698893,LOC107555241 coding upstream 348404 1574618 ~ 1583412 (+)
runx1 runx1,LOC107555250,LOC107698911,LOC108429862,LOC107653683,LOC107571884 coding upstream 360928 1525107 ~ 1570888 (+)
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding upstream 466531 1456086 ~ 1465285 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding downstream 4306 1937450 ~ 1941621 (+)
gart gart coding downstream 8917 1942061 ~ 1961643 (+)
LOC122350785 adamts5,LOC107751075,LOC107593743 coding downstream 220092 2153236 ~ 2171533 (+)
adamts1 adamts1,LOC107698918,LOC107751074,LOC107593742 coding downstream 245067 2178211 ~ 2184501 (+)
appa app,appa,LOC107698920,LOC107593741,LOC107751095,LOC103352860,LOC108232458 coding downstream 259777 2192921 ~ 2219736 (+)
G312 NA non-coding upstream 25853 1905652 ~ 1905963 (+)
G273 LOC107698895,LOC107555251,LOC107751082 non-coding upstream 320640 1541322 ~ 1611176 (+)
G270 NA non-coding upstream 446173 1485146 ~ 1485643 (+)
G227 NA non-coding upstream 463685 1467485 ~ 1468131 (+)
G203 atp1a1a.1,LOC107718011,LOC107698904,LOC107555257,LOC107653678,LOC107717912,LOC105923069 non-coding upstream 532842 1396899 ~ 1398974 (+)
G320 NA non-coding downstream 3029 1936173 ~ 1951320 (+)
G404 NA non-coding downstream 148328 2081472 ~ 2081820 (+)
G408 NA non-coding downstream 185972 2119116 ~ 2119391 (+)
G415 NA non-coding downstream 241178 2174322 ~ 2175616 (+)
G450 NA non-coding downstream 341863 2275007 ~ 2275341 (+)
LOC122327253 NA other upstream 490150 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 811095 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1482176 445940 ~ 449640 (+)
G10 NA other upstream 1753616 177716 ~ 178200 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 252677 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 550496 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 560428 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 578428 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 591381 2524525 ~ 2527244 (+)

Expression


Co-expression Network