G3381 (LOC107714625,LOC107695349,LOC107595098)


Basic Information

Item Value
gene id G3381
gene name LOC107714625,LOC107695349,LOC107595098
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14862612 ~ 14869892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4862
ATTCACCGTGCTAAGTAAAGaacaaatataatgcattttctgaaaacttttttttttggttgccaTACCCTAATGCTGCGTCCCTACAGACACTTACTAGGATAGTATCATTAATGCCTCAAACCTcaaagttgattttttttttctgcagtttttGATTGAGAGTGACGCCGCGTGAAGGCATATTAAAAACGAACAACCGTCAACCATAAATTACTAAACTCACAGGaaggaaaataattaaaatgtttaatactcAAACAGCATAAAAACCCACAAACAATAGGCTACTTTAAATGATCATTAGCCTACAAATATGAAAGTGCATCACAGCGGCGCTCATTTCTtgactttttacagttttattcctgTCACATTAAGctatgtgataaatatgtagttactaaaaaaaaaaaaaacacacattagcGTTTAAATACTAGTGAGAAATTCGACCACGTCCATGTGGCCAGTCTGCCGTGCCACATCCACGGGTCGTAAATTGAAGTGATCTGTCGCGTTGGGGTCGGCGTTAAAGCGAACGAAGAGCCGCACGGTGTCGGTGAAGCCGGTTCTGGCCGCGTCGTGCAAAGGAGTGCTTCCTGTTCTGGGGTCAGGAACATTAGGATCTGCTCCGTGTTCCAGCAGCAGGTGAGCCAGAGGTGTGTTTCCCATCATCACCACCTGCGGGCTCAAAACACGTGCAatctgtataataataattgccccttcctttctattaaaaataaagaaataatcatACGAACACGAATTTCCGACTTTAAATGTCGTTATTTTGTTTCGGTAAGAACAGTGTAGCTGGTTGGTGCATAGTGCAGGCTATTAGTACAGTAGCAAGATTCATTATTTAACTGCTCATGTTGTAGGctaatgtttgattttattattacttaatattgtttttgtttgtagcaTACGAGTAGGCTATGCCTGCTTTGTAGCTTAAAGGCCTAATCTAAACACATTTCGTTAAAAATAGCTCGAGGACTGTAGGGTCTAATCACTCACTTAGTCATtgcttatgatttttttttgtaaaactatTACATCGTCGCTTTATTCCCGCGCAGACACGAGTAACACCATCTTTAGAGGAGCATGGGAATTAGGTGAATTTTTTTCAAACCTGACCACAACCTTCCTGAAGTGACAGCTGGACAAAAAGTTTTATCTGGATCATAATATTAGTACCCGGATGTATAAATGTCGACGCGGACagcctgttttattttttaagtatagcACGTACGCTACATTCACAAATATCAAACATTAGCTTTTTCTATGATTTACAATCGTTCTGGTAGTACAGAACtcttttgaaattaatttagacCGTTTAGGAATAgcataaacttaaaaaaaaaaaaaaagatttatgaagATAGATAAAACGCGACGACGAAATACTCCGCAGTCTATGAAACTCAAAAGTAGCCTACAGTTAATAAAACtggatgaattaaaaaaaaatttaagtagcTACAtgattttatatctttatatttctatattaatttGAACTGTTATTGTTGTGAGACTGTTAAAATATCACGAGTAGGCTACATTACATTTAAGACTAATAACACAAGGCAGGCTCGGCTTTTTTTTCCTACGAGTTTAAACGTGTCAGGTCACGTGTGTGGTTTTTCTTCtaacaagataaatgttttaaccTTGAATATAACACGTATAggataaatactttatttaaataagcatatttttctattacattacgaaaatgaataatattaaacatattcattGCCTATTAGAACTGCGTTATTGTCATGTTCCGAAAATTCACTACTCTGCAGACAACGTAAATATGAAatcaatgtaaataataataactataataaatatatacttataaaatcatattaaaccgagtgtaaaaaaaagaattaggcTAAACCAAATTCAAAAGTTAGGACAGGCTATTAAGTTGTAGGCCTATTACCATCAGATAAAATAACTTCGTATATTTCCTTTAGGCGcctttgtatgtttatatttaatatgttactTGTACATCTGCAGTCCGtcttatgtttgtgtttttacttgCTTGTTTATTGTCAGTGTGTCTTAAACCTACCTGTATAGGTGTTCTCCCGAATTTGTTAACGCCGTTCGCATCGACTCCGTTAGACAGTAAAAACTGAACACGGGAAGTATTTCCAGTCGCGGCTGCTTTGGTCAGTTCATCCTCGGCATGCATCATTTTTATCATCAGTCCACTGAAGGATTTCGCTTTGACAGGTAGAAGCGATAATAAATAATCATCTACTGGATAAGCTACTGCGAAAATAATCCAcatagcattttcattttcgtTTCCAGACGTGAAAGGATCCTCTAAGCTGGCTAAATACGTTAAATCGACTTCTTTATAAGGCTGCCGtgtcttattattattgcacGTATAGGGAGATATTTGTTCGGACTTGCCTCTGTTATGAACGTCACGGCAACTGCAGTAGTGCGTGCACTGCGCATGCGCACTCAAACAGCTGATCCAGGAAGACTCGAAGCTACGGTGACAACGGTTAAGGAGAAGGAACCGTCGGTGTTTTAAAACTGAcattaaagatattaaaaaacagTCGCGAGAACGGGTTTTGTTTGTCGGTGTCCACAATCAGAATTATAGGCTACACATTCAGGCAAATGCAGTTTGGGGTATTTTGGATAGGCTCTTTTGGAGTGATGGCtatccaggaaaaaaaaaaatcagattggTGAAGATGTTCTACAAT

Function

NR:

description
PREDICTED: cyclin-dependent kinase inhibitor 2A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4862 True 2786 lncRNA 0.37 2 14862612 14869892

Neighbor

gene id symbol gene type direction distance location
LOC122348129 mtap,LOC107595051,LOC107714626,LOC107700323,LOC107598256,LOC107757575,LOC102313215 coding upstream 696 14854210 ~ 14861916 (+)
toporsa topors,LOC107695355,LOC107700322 coding upstream 8702 14850160 ~ 14853910 (+)
ndufb6 ndufb6 coding upstream 12941 14848013 ~ 14849671 (+)
mxd4 mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283 coding upstream 19203 14832703 ~ 14843409 (+)
fabp2 fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591 coding upstream 199511 14661658 ~ 14663101 (+)
tet2 LOC107714646,LOC107695330,LOC107595052,LOC107598249,LOC107700324,LOC107757629 coding downstream 68845 14938737 ~ 14959108 (+)
arhgef38 arhgef38,LOC107695304,LOC107714644,LOC107700325,LOC107757628 coding downstream 96542 14966434 ~ 14976255 (+)
g3bp2a g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276 coding downstream 110480 14980372 ~ 14988078 (+)
uso1 uso1,LOC107714641 coding downstream 118505 14988397 ~ 15004240 (+)
coro2aa coro2a coding downstream 135715 15005607 ~ 15024881 (+)
G3394 NA non-coding upstream 50469 14749316 ~ 14812143 (+)
G3391 gpank1,LOC107700266 non-coding upstream 52891 14745709 ~ 14809721 (+)
G3384 NA non-coding upstream 79773 14716000 ~ 14782839 (+)
G3374 NA non-coding upstream 87935 14681459 ~ 14774677 (+)
G3370 NA non-coding upstream 183668 14672314 ~ 14678944 (+)
G3432 NA non-coding downstream 155818 15025710 ~ 15029067 (+)
G3443 NA non-coding downstream 167387 15037279 ~ 15037670 (+)
G3431 NA non-coding downstream 193359 15063251 ~ 15114948 (+)
LOC122350773 NA non-coding downstream 575296 15445188 ~ 15446124 (+)
G3593 NA non-coding downstream 600730 15470622 ~ 15475480 (+)
G3380 LOC107572695,LOC107695836 other upstream 70824 14723545 ~ 14791788 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 249935 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 258724 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 381266 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 744179 14114431 ~ 14118433 (+)
hemgn hemgn,trmo other downstream 161052 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 308711 15178603 ~ 15317624 (+)
G3599 NA other downstream 608206 15478098 ~ 15498680 (+)
G3647 NA other downstream 783201 15653093 ~ 15653381 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 1194379 16064271 ~ 16069915 (+)

Expression


Co-expression Network