G3431


Basic Information

Item Value
gene id G3431
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15063251 ~ 15114948 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4920
CTGCAATGTTATTagtagcaaaaatgtaaataatcacTCCATCGGTGTAATTTGATGTGACCAATTTCAAATTTTGACGAAAACTCAATTTCGTATTTTCAGACTGTGTTGATTCAGTAGCATCACCTGCTGGTTTGtccaacaaaacacacacacacacacacacaccacaaagcacttttaaactgttgttgttgtttttttattgtagttgcactatttttttttttttcattctcagTACAAGCCTAACAATTCAGATGAGTCACTGAAAATTCATGCCGGAGTTGATATGCAGTGCTTTCTGACTAAACGCTCCCCCAGCACTTTAATAAATATCCAGTGTCTATTTTACATCTAGTGGTAAATGCTTTAACACTGATCCAAAAGTAACACATGGTACTACATGACTACAcacaaataagaaacaaaacacaaaaacgtCTGTACAGACCTCACTGAGGATAAACaacaattgaaaaaatattggaATGTCCCGCCAATACAAGATacgttcattttatttttaaaatataaagggGATCTTAGATCtgacaataataaatacatcaacTAAACGCACTTAAAATCTTTTAAGAATACATTATCTTATTCTGTCTGTGGAAATATTAGGCCAGATTATACATCGTTTACAGTCAGAAATGAATCCTTGCCTTAGAGCAGACATCAGGTGATGCGTGTAATTTTTGTgatgttaaaatattcataGAGGTGCAATAACCGTGTGCTAAAGAGTTTAAACACTGTTGCTCTGTGGCACCTTCGAATTCAGGCCAGGACTGTCTgcgtttttttaattcatttctctacatttttatttgatgtggATACTAGCACAAAAactacacacttcacctttacaaaaggaaaaaagatatatgaaaaatgtttgatATGCACAGTTTCATGGGTTCAGATAACATACTCaggcacacacacgcacacacacacacacacacacacacacacacact

Function

NR:

description
PREDICTED: large proline-rich protein BAG6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4920 True 995 lncRNA 0.35 2 15063251 15114948

Neighbor

gene id symbol gene type direction distance location
spag5 LOC107714621,LOC107695699,LOC107595089 coding upstream 13328 15038404 ~ 15049923 (+)
coro2aa coro2a coding upstream 38370 15005607 ~ 15024881 (+)
uso1 uso1,LOC107714641 coding upstream 59011 14988397 ~ 15004240 (+)
g3bp2a g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276 coding upstream 75173 14980372 ~ 14988078 (+)
arhgef38 arhgef38,LOC107695304,LOC107714644,LOC107700325,LOC107757628 coding upstream 86996 14966434 ~ 14976255 (+)
psip1a psip1,LOC107658176,LOC107572235,LOC107742007,LOC108439950 coding downstream 542349 15657297 ~ 15690847 (+)
raph1b raph1b,LOC107707841,LOC107588825,LOC107719733,LOC107556694,LOC107654246 coding downstream 908991 16023939 ~ 16064272 (+)
cpb2 cpb2 coding downstream 959367 16074315 ~ 16078793 (+)
zc3h13 zc3h13,LOC107588823,LOC107707838,LOC107654272,LOC107719732,LOC107705029,LOC107556716 coding downstream 964462 16079410 ~ 16092907 (+)
tm9sf2 tm9sf2,LOC107654273,LOC107556717,LOC107719731,LOC107705039,LOC107588853,LOC107707817 coding downstream 978254 16093202 ~ 16104199 (+)
G3443 NA non-coding upstream 25581 15037279 ~ 15037670 (+)
G3432 NA non-coding upstream 34184 15025710 ~ 15029067 (+)
G3381 LOC107714625,LOC107695349,LOC107595098 non-coding upstream 193359 14862612 ~ 14869892 (+)
G3394 NA non-coding upstream 251108 14749316 ~ 14812143 (+)
G3391 gpank1,LOC107700266 non-coding upstream 253530 14745709 ~ 14809721 (+)
LOC122350773 NA non-coding downstream 330240 15445188 ~ 15446124 (+)
G3593 NA non-coding downstream 355674 15470622 ~ 15475480 (+)
G3630 sugt1,sgut1 non-coding downstream 517833 15632781 ~ 15635944 (+)
G3646 NA non-coding downstream 537882 15652830 ~ 15653029 (+)
LOC122348671 NA non-coding downstream 550280 15665228 ~ 15668159 (+)
hemgn hemgn,trmo other upstream 28451 15030944 ~ 15034800 (+)
G3380 LOC107572695,LOC107695836 other upstream 271463 14723545 ~ 14791788 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 450574 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 459363 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 581905 14480198 ~ 14481346 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 63655 15178603 ~ 15317624 (+)
G3599 NA other downstream 363150 15478098 ~ 15498680 (+)
G3647 NA other downstream 538145 15653093 ~ 15653381 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 949323 16064271 ~ 16069915 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other downstream 2436525 17551473 ~ 17610745 (+)

Expression


Co-expression Network