G3502


Basic Information

Item Value
gene id G3502
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14848025 ~ 14848576 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5052
ACCGGAGGACAGCGTGAACTTACAGTGACGTGGTACTTCATGTAGTAATGCACGATCCAGGCTGGGATCAGAACCCTCGTGACAGCAAAGACACCGGCGTTATAGGCTTTAAACGTATAGTCTCCAGAGCGTCTTGGGCTGCAGAAACTCAGCCCAGAATCTCTCGAGGCGGCCGGGTGTTTTGGGCGCAAGGACGGGTTCTCGAGGACTAAGCTCCTGGTCTTTGAGCCACTGCCGCCGCAGCTTTGTTAACTGCGCTAAGCGAAGTTTTTCATCCGCTGAGTACCCACTCATACTGATATTCTCCTCTTTATCGAATAAAGCCCAATTTGCAATGTCAACTAAAGAGGACAAACCTCCCAGAGTTCAAAGCGAACTTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5052 True 383 lncRNA 0.51 2 14848025 14848576

Neighbor

gene id symbol gene type direction distance location
pdcd4a pdcd4a,LOC107695387,LOC107595047,LOC107714648,LOC107757625,LOC107700321 coding downstream 19999 14816866 ~ 14828026 (-)
gpank1 gpank1,LOC107682883 coding downstream 35278 14807902 ~ 14812747 (-)
si:ch211-145b13.6 NA coding downstream 41778 14804654 ~ 14806247 (-)
kcnip4b si:ch211-145b13.5,LOC107757593,LOC107695828,LOC107700280,LOC107714629 coding downstream 44171 14796045 ~ 14803854 (-)
synpo2b LOC107572695,LOC107695836 coding downstream 54659 14786399 ~ 14793366 (-)
cdkn2a/b LOC107595098,LOC107714625,LOC107695349 coding upstream 14268 14862844 ~ 14865133 (-)
ppa2 ppa2,LOC107714645,LOC107595053,LOC107695313 coding upstream 110589 14959165 ~ 14963133 (-)
ints12 ints12,LOC107714643,LOC107695298,LOC107595100 coding upstream 127787 14976363 ~ 14979418 (-)
anp32b anp32b,LOC107595056 coding upstream 176069 15024645 ~ 15029358 (-)
trmo trmo,LOC107580156 coding upstream 184593 15033169 ~ 15037691 (-)
LOC122336348 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107598280,LOC107700316,LOC108442608 non-coding downstream 74105 14772740 ~ 14773920 (-)
LOC122336242 NA non-coding downstream 75295 14771467 ~ 14772730 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding downstream 89000 14758120 ~ 14759025 (-)
G3493 NA non-coding downstream 97851 14749387 ~ 14750174 (-)
LOC122353106 NA non-coding downstream 105389 14742108 ~ 14742636 (-)
G3546 NA non-coding upstream 152709 15001285 ~ 15004288 (-)
G3570 NA non-coding upstream 380760 15229336 ~ 15229753 (-)
G3572 bnc2,LOC107595060,LOC102789865 non-coding upstream 426308 15274884 ~ 15275311 (-)
G3577 bnc2,LOC107737409,LOC107737408,LOC107678088,LOC107595060 non-coding upstream 455412 15303988 ~ 15306245 (-)
G3578 NA non-coding upstream 458072 15306648 ~ 15306904 (-)
G3491 gpank1 other downstream 99050 14746829 ~ 14748975 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other downstream 133479 14686596 ~ 14714546 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other downstream 160165 14661474 ~ 14687860 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other downstream 952741 13881893 ~ 13895284 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other downstream 1005361 13829463 ~ 13842664 (-)
cxxc4 cxxc4,LOC107695705 other upstream 49625 14898201 ~ 14918786 (-)
G3522 NA other upstream 76509 14925085 ~ 14925363 (-)
G3515 coro2a other upstream 172066 15020642 ~ 15029620 (-)
G3571 NA other upstream 381963 15230539 ~ 15230886 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 1220601 16069177 ~ 16073920 (-)

Expression


Co-expression Network