G3515 (coro2a)


Basic Information

Item Value
gene id G3515
gene name coro2a
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15020642 ~ 15029620 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5072
aatttatataaaatgctttgCTTCCCACAGATTAAGCacttacataataaaataaaggaaTGCAATCAAGGTTGTTTGGACaacatttagtaaatatttcagCAACAACACTTAAAATAGCATCTTTAACCTcttatttagattatatattcTAACATGTGCGTATCCATATAGAAACAGAGTTTAAAAGTATGGCTTGTTCAAATTTGTGAAAGGCTCCAAATGGAcgactatttttaaaatggccaTTTTGAGTGAAACACGATAATTCAGTAAAATGTGGCGGTCCTTACATGCATTTTGAACAGTTTGGCAGTTCATAGCAAGCATGTTGCAGAATGGGATCTTGTCAGTGGATGACAAAATTCAGAGGAATTACTGAACCTAAACCTGCCGGAAACCCAGCCAGTTCCCACGGTGCTACCGCttcagtgcatgctgggatttGTTTGAACACACAGAAAACTAAATCTCTTTAATATAACGTGATAATGCACACGTGTAGAACTCACGGTTTTCGAATGTACCTCCCTTTGTtctaaaaatgttgcatttgcaTAATTACGATCAAACTTTCATGCCGCAACACTCATCCATCAGCACAggaatttaaatagaaaatgaatctgaaaaagaaatctCATTACGGTTATATTCACGCGAAATTTCAAATAACCCAGTTCATAAAACGAAACGCGCAAATGCTCATTTACgccgttttttttaaaatagtaataaaacaaacatttaacaaatCTGATCATAAGCTTGCATAGTGCTAAAGTCTAATAAAAAATTTCCACAAAGGTTGTACAGTAAATAATGTGCACAAAACGTGCATACAAGGAATGACTTTCCATAAAGAGACGCTAAAAGTGGATGTAGACCATGTGTTTCCTCGAGGCACGGTCACATTAGCGAAATTTCGCGGGCAAAAAGGTCTATTGTCCGTTGTCAAAAGTGTAGCGATGAATGAAGTCACTTCAAATCCAAGCAGCTTTCCATTGGTCAATGGCTCAAATTTGAGTGACCAACCGCCAAGCGAACCGATTCCTCTAGGAATGACTGGACCGTACCTTTACAGCATAATTCATGAGGCGGAACATTTTCACGTGAATGTTAGTGAAGCGGACGAGGCTGTGAGACAGTGTTATGTACTATAGTCTCTTTTAAAGATTAGCTTGTGAGTTTCTAACATTTTTGATTTCTAATTCCAACTGTTTTATCCGCACATCCTTCTGGTTAAGCTGCTCCTTTAGTCTTCGGATCTCTTCCTGCTGCTTATAAAACATTTGTCGTAGCTATATGcagaaacaaatacatcaaCACACATTAGAGGAAGGTTTTTTGCTATATCTGAGCTATAGCTAGAAGCTATACGTAGCGTACCTCATTCTCTGTTTTAGGCGGCGAGCAGCGCGTGGAATCTAGTTGTCCGTTGCTGACGTAGCTTGTAGAGGTGCTCTTTGCATCTGTGGAGAGGAGCAGAGAGGTAGGGGGCGATTCTTTGTGTGCGTTCCCTTCTTTGGCATCCAGCCGTTCCTGAATCAGCAGTGATAGTCCTGGCCGACTGCGAGAGTGCTGCGTCTCCGTGGAGTCAGTCGAGTCTTTCCCTGAACCCAGTTCCACGTACGAGTCCAGTTTACTTCCAGGCCTCAGAGACATCATCACAGGAC

Function

symbol description
coro2a Predicted to enable actin filament binding activity. Predicted to be involved in intracellular signal transduction. Part of transcription repressor complex.

NR:

description
PREDICTED: coronin-2A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5072 True 1676 TUCP 0.40 2 15020642 15029620

Neighbor

gene id symbol gene type direction distance location
ints12 ints12,LOC107714643,LOC107695298,LOC107595100 coding downstream 41224 14976363 ~ 14979418 (-)
ppa2 ppa2,LOC107714645,LOC107595053,LOC107695313 coding downstream 57509 14959165 ~ 14963133 (-)
cdkn2a/b LOC107595098,LOC107714625,LOC107695349 coding downstream 155509 14862844 ~ 14865133 (-)
pdcd4a pdcd4a,LOC107695387,LOC107595047,LOC107714648,LOC107757625,LOC107700321 coding downstream 192616 14816866 ~ 14828026 (-)
gpank1 gpank1,LOC107682883 coding downstream 207895 14807902 ~ 14812747 (-)
trmo trmo,LOC107580156 coding upstream 3549 15033169 ~ 15037691 (-)
foxe1 foxe1,LOC107598243,LOC107757598,LOC107700287 coding upstream 21199 15050819 ~ 15052876 (-)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329,LOC107695241,LOC107598242 coding upstream 33817 15063437 ~ 15079410 (-)
cntln cntln,LOC107595061 coding upstream 67401 15097021 ~ 15178446 (-)
pspc1 pspc1 coding upstream 497534 15527154 ~ 15581541 (-)
G3546 NA non-coding downstream 16354 15001285 ~ 15004288 (-)
G3502 NA non-coding downstream 172066 14848025 ~ 14848576 (-)
LOC122336348 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107598280,LOC107700316,LOC108442608 non-coding downstream 246722 14772740 ~ 14773920 (-)
LOC122336242 NA non-coding downstream 247912 14771467 ~ 14772730 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding downstream 261617 14758120 ~ 14759025 (-)
G3570 NA non-coding upstream 199716 15229336 ~ 15229753 (-)
G3572 bnc2,LOC107595060,LOC102789865 non-coding upstream 245264 15274884 ~ 15275311 (-)
G3577 bnc2,LOC107737409,LOC107737408,LOC107678088,LOC107595060 non-coding upstream 274368 15303988 ~ 15306245 (-)
G3578 NA non-coding upstream 277028 15306648 ~ 15306904 (-)
G3581 NA non-coding upstream 280715 15310335 ~ 15310542 (-)
G3522 NA other downstream 95279 14925085 ~ 14925363 (-)
cxxc4 cxxc4,LOC107695705 other downstream 101856 14898201 ~ 14918786 (-)
G3491 gpank1 other downstream 271667 14746829 ~ 14748975 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other downstream 306096 14686596 ~ 14714546 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other downstream 332782 14661474 ~ 14687860 (-)
G3571 NA other upstream 200919 15230539 ~ 15230886 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 1039557 16069177 ~ 16073920 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other upstream 1130072 16159692 ~ 16198263 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other upstream 1304582 16334202 ~ 16359025 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 1417468 16447088 ~ 16448519 (-)

Expression


Co-expression Network