G3693



Basic Information


Item Value
gene id G3693
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15757933 ~ 15758145 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU5277
ggcccaggcctttactgaataaaatcatgcccagtaatgtgtaactgctatggggttagtctgtgagcctggatgtctgggtttaggttttaaatgcttcaatatttcttctagggttaccatgttcgagtgggaaaacctacgagaagtcacacttttagcccggccaagatcatgcccatgaaagtgtcatagtaatggggtgagtttgtg

Function


GO:

id name namespace
GO:0007507 heart development biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA


RNA id representative length rna type GC content exon number start site end site
TU5277 True 213 lncRNA 0.45 1 15757933 15758145

Neighbor


gene id symbol gene type direction distance location
psip1a psip1,LOC107658176,LOC107572235,LOC107742007,LOC108439950 coding upstream 67086 15657297 ~ 15690847 (+)
spag5 LOC107714621,LOC107695699,LOC107595089 coding upstream 708010 15038404 ~ 15049923 (+)
coro2aa coro2a coding upstream 733052 15005607 ~ 15024881 (+)
uso1 uso1,LOC107714641 coding upstream 753693 14988397 ~ 15004240 (+)
g3bp2a g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276 coding upstream 769855 14980372 ~ 14988078 (+)
raph1b raph1b,LOC107707841,LOC107588825,LOC107719733,LOC107556694,LOC107654246 coding downstream 265794 16023939 ~ 16064272 (+)
cpb2 cpb2 coding downstream 316170 16074315 ~ 16078793 (+)
zc3h13 zc3h13,LOC107588823,LOC107707838,LOC107654272,LOC107719732,LOC107705029,LOC107556716 coding downstream 321265 16079410 ~ 16092907 (+)
tm9sf2 tm9sf2,LOC107654273,LOC107556717,LOC107719731,LOC107705039,LOC107588853,LOC107707817 coding downstream 335057 16093202 ~ 16104199 (+)
zic2b zic2b,LOC107707837,LOC107588821,LOC107654274,LOC107699076,LOC107719739 coding downstream 358945 16117090 ~ 16119734 (+)
G3680 NA non-coding upstream 58499 15699223 ~ 15699434 (+)
G3674 NA non-coding upstream 63234 15694387 ~ 15694699 (+)
G3650 NA non-coding upstream 72926 15684209 ~ 15685007 (+)
LOC122348671 NA non-coding upstream 89774 15665228 ~ 15668159 (+)
G3646 NA non-coding upstream 104904 15652830 ~ 15653029 (+)
G3695 NA non-coding downstream 80213 15838358 ~ 15838596 (+)
G3696 NA non-coding downstream 84166 15842311 ~ 15842799 (+)
G3705 NA non-coding downstream 262024 16020169 ~ 16020517 (+)
G3707 NA non-coding downstream 346927 16105072 ~ 16105273 (+)
G3846 NA non-coding downstream 755805 16513950 ~ 16515088 (+)
G3647 NA other upstream 104552 15653093 ~ 15653381 (+)
G3599 NA other upstream 259253 15478098 ~ 15498680 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other upstream 440309 15178603 ~ 15317624 (+)
hemgn hemgn,trmo other upstream 723133 15030944 ~ 15034800 (+)
G3380 LOC107572695,LOC107695836 other upstream 966145 14723545 ~ 14791788 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 306126 16064271 ~ 16069915 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other downstream 1793328 17551473 ~ 17610745 (+)
lsm6 lsm6 other downstream 2138390 17896535 ~ 17898546 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other downstream 2489105 18247250 ~ 18284644 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other downstream 3762939 19521084 ~ 19522399 (+)

Expression



Co-expression Network