G3696


Basic Information

Item Value
gene id G3696
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15842311 ~ 15842799 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU5280
CACAGGTTCGGATCCCTCATAAGAAGTTAGGCCAGACACTTGGGtagcatataaaagtataaagtttattaatacataaactttaaaatacgggggcaaaaagaaaaagcaccgcttcaaaacaaaagaatatgaATACAGAATTAATCTAAGGTTGAGGCCCTAGAACAAAATCACATACATCCAGCAGGGCTGAGGCTTCCAGTGGCAAGAGGAGTTCGGTTTTTACGATggcacacttccacacacacacctgtgcactcagatcacaCTACTAAACACTCAGTGTTACACAGCATACCAAGAACCACCACCAGGAGAGAAATCCAACCACCCGTGGGACCCCAGCTCCTGcaatgaagcaaaaacaaagtaaaatacaaaattacaacaacatcaacctcaaagtataacaaacaatacattaaagccaCGCCGCACCACAGGggtacaaacaaaagaaaacaaaaagacttaaatcaaatacaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC104957816

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5280 True 489 lncRNA 0.41 1 15842311 15842799

Neighbor

gene id symbol gene type direction distance location
psip1a psip1,LOC107658176,LOC107572235,LOC107742007,LOC108439950 coding upstream 151464 15657297 ~ 15690847 (+)
spag5 LOC107714621,LOC107695699,LOC107595089 coding upstream 792388 15038404 ~ 15049923 (+)
coro2aa coro2a coding upstream 817430 15005607 ~ 15024881 (+)
uso1 uso1,LOC107714641 coding upstream 838071 14988397 ~ 15004240 (+)
g3bp2a g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276 coding upstream 854233 14980372 ~ 14988078 (+)
raph1b raph1b,LOC107707841,LOC107588825,LOC107719733,LOC107556694,LOC107654246 coding downstream 181140 16023939 ~ 16064272 (+)
cpb2 cpb2 coding downstream 231516 16074315 ~ 16078793 (+)
zc3h13 zc3h13,LOC107588823,LOC107707838,LOC107654272,LOC107719732,LOC107705029,LOC107556716 coding downstream 236611 16079410 ~ 16092907 (+)
tm9sf2 tm9sf2,LOC107654273,LOC107556717,LOC107719731,LOC107705039,LOC107588853,LOC107707817 coding downstream 250403 16093202 ~ 16104199 (+)
zic2b zic2b,LOC107707837,LOC107588821,LOC107654274,LOC107699076,LOC107719739 coding downstream 274291 16117090 ~ 16119734 (+)
G3695 NA non-coding upstream 3715 15838358 ~ 15838596 (+)
G3693 NA non-coding upstream 84166 15757933 ~ 15758145 (+)
G3680 NA non-coding upstream 142877 15699223 ~ 15699434 (+)
G3674 NA non-coding upstream 147612 15694387 ~ 15694699 (+)
G3650 NA non-coding upstream 157304 15684209 ~ 15685007 (+)
G3705 NA non-coding downstream 177370 16020169 ~ 16020517 (+)
G3707 NA non-coding downstream 262273 16105072 ~ 16105273 (+)
G3846 NA non-coding downstream 671151 16513950 ~ 16515088 (+)
G3902 NA non-coding downstream 780018 16622817 ~ 16701710 (+)
G3952 NA non-coding downstream 960588 16803387 ~ 16805316 (+)
G3647 NA other upstream 188930 15653093 ~ 15653381 (+)
G3599 NA other upstream 343631 15478098 ~ 15498680 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other upstream 524687 15178603 ~ 15317624 (+)
hemgn hemgn,trmo other upstream 807511 15030944 ~ 15034800 (+)
G3380 LOC107572695,LOC107695836 other upstream 1050523 14723545 ~ 14791788 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 221472 16064271 ~ 16069915 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other downstream 1708674 17551473 ~ 17610745 (+)
lsm6 lsm6 other downstream 2053736 17896535 ~ 17898546 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other downstream 2404451 18247250 ~ 18284644 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other downstream 3678285 19521084 ~ 19522399 (+)

Expression


Co-expression Network