G4678 (dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932)


Basic Information

Item Value
gene id G4678
gene name dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19978969 ~ 19980622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6641
TCCTAGCGATGAGAGACGTacaaaacaaagggaagatGGATGAGTTTCTAATTGTGGATTTTCCTCAATAGCCAGGGCATTTAGACTTCTTCGTAGGGGAAAAAATAATGGTACGGCATTTGGTTCAAGCCTATGGTTAAATCCATCGCATCCTGTAAACTCTTTCATTTGGTGTGGTCATCatatcagcattttattttccgAGTTGTGTATTCTGAGTCGTCTAGCTCACAGAATGCGACCATTTTTACGAATAATAGCGTCCCCCACAgtccaaaatatgtataaaacgatgtgaatttttttaaataacataaatcatTCATGGGTTTTCTTTGACATATTTCACTAAGGGACATAATTTAAGTTATATTAAGCCATACAAATTTTAATACACAGGGTTccctttaagaaaaatatttaaaaatattagtatgaACATGCATGGAATGTGTAAATTGCTATATTATacagttatttttgtgttttgaagcttTTGATGAAGTTCTGCAGGTGTAGTTTTTGTGCAGAACTAGATGTGACTTATGTTGCACTAATGCACTACTAGAGCAGTGAGAGGTAGTTTGGAGTCTGGTGTCCGATTTGAGCACCCCTGCCCCCTCAAGTTCCTCCACTTGGCAGGAGACCTTTCACATGCCGCCTCACCATCTAAACACATAAAACTGCCCAGAGTTCCCCGCATAGCGCATTCAAACAGCATCTAACAAACACCCCGAATACCATTAGGAGTGACAGATTAATTAGCCTGATTATAACTGCgataaaacacactttttctgTTGTGACATGGCTGTCATGGTAAGGAAGTTTCATATAAGATGGAGCATTAATGCTGCTGAAGCTACAGAACAGCTGCAGATGGATTTGCCAGAGAGGCAGCTGGTAGGTTTCACTGGTGCTAACGCAACATCTTATACTGAAGCCCATCACACATTACCACAATCTGTGTGTGGGTGCACAAAAGTAATGTGTACTGATTCTGTAAGTATGGGGGAGCGAGAAAAtgtgagagagggagggagagagaaacacTCTGTGTGAGGATATCTGATTTTCACATTTACTATTGGCAAACACCTCTGTGCTACTTCCACCACAGGGAATATCACTAAGACTAAGTGGAAAAAGTGGCAGAGAAGGAGACAACTTTGTACGAGAAAAAGCTACACGTTCAACTCATCATCAAGGGATTCTTCTCAATGAATAAAAAGCAGTAATCTGCCAGAATGAAGAACGAGCCATGTCCAAGAATCTCTTCGCATCTCAGAAAGACCAAGTGACAACCGAGAAACTCAACAAAGAACGAAAAAGAACAGCACCGAATGAACAAAAGAACAATAGCGTGAACTTACAGTAGCCGCATCGTGTACCTCCCtcaaaaacaaatccattaggAACGGCACCATATCGTCTCAAGTCTGACAGTTTCCATTGGCCGAGGACAGTTGGAGGCAGGTCTCTGGCGATGACAAGCAAGTTGTTGCACAAATGCAGCGAGGCAGGGCCACTTTCTAGTTTGGTGCCGGGCTGGACGTTGACATTAAACCTGTGGACTGGAAGAGAGACAAGTTTATTATCTTTATAGAAGattattatctttaaaattaaaacatgtcGACTGCAATTAAAGGCT

Function

symbol description
dok7 Enables protein kinase binding activity. Involved in positive regulation of protein tyrosine kinase activity. Located in mitochondrion and nucleoplasm. Implicated in congenital myasthenic syndrome 10 and fetal akinesia deformation sequence syndrome 3.

NR:

description
PREDICTED: protein Dok-7-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6641 True 1654 lncRNA 0.41 1 19978969 19980622

Neighbor

gene id symbol gene type direction distance location
lrpap1 LOC107749950,LOC107551171,LOC107714242,LOC107679883,LOC107556528,LOC107674255 coding upstream 12187 19963157 ~ 19966782 (+)
cpz cpz,LOC107712018,LOC107752940 coding upstream 133683 19836242 ~ 19845286 (+)
gpr78a LOC107712019,LOC107552545,LOC107671586,LOC107556530,LOC107674203,LOC107752934 coding upstream 144018 19831985 ~ 19834951 (+)
htra3a htra3,htra3a,LOC107671567,LOC107674193,LOC107752916,LOC107712020 coding upstream 161308 19810117 ~ 19817661 (+)
LOC122353552 zgc:194443,LOC107552058,LOC107551053 coding upstream 169929 19805893 ~ 19809040 (+)
si:ch211-89o9.4 LOC107679878,LOC107750040 coding downstream 108106 20088728 ~ 20096155 (+)
paip2b paip2b,LOC107551309,LOC107674237,LOC103039606,LOC108263850,LOC105904045,LOC108426126 coding downstream 117149 20097771 ~ 20101054 (+)
dok1a LOC107750021,LOC107551292,LOC107556522,LOC107714239,LOC107679877,LOC107674236,LOC107552160 coding downstream 121402 20102024 ~ 20106732 (+)
si:ch211-89o9.6 LOC107749865,LOC107714238,LOC107551277,LOC107674264,LOC107551252 coding downstream 126226 20106848 ~ 20112238 (+)
trnak-cuu NA coding downstream 131820 20112442 ~ 20112514 (+)
G4677 dok7,LOC107749932,LOC107674231,LOC107552150,LOC107714234,LOC107679881 non-coding upstream 6704 19970776 ~ 19972265 (+)
G4579 NA non-coding upstream 200886 19743162 ~ 19778083 (+)
G4553 NA non-coding upstream 404209 19574411 ~ 19574760 (+)
G4531 NA non-coding upstream 454189 19524546 ~ 19524780 (+)
LOC122333031 NA non-coding upstream 802142 18993761 ~ 19176827 (+)
G4679 dok7,LOC107552150,LOC107749932,LOC107679881,LOC107674231 non-coding downstream 2182 19982804 ~ 19983127 (+)
G4680 NA non-coding downstream 4103 19984725 ~ 19984981 (+)
G4686 rgs12b,LOC107749922,LOC107679871,LOC107551217 non-coding downstream 18719 19999341 ~ 20000548 (+)
G4817 NA non-coding downstream 373356 20353978 ~ 20354347 (+)
G4820 NA non-coding downstream 377318 20357940 ~ 20417720 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 201919 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 456570 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 1694325 18247250 ~ 18284644 (+)
lsm6 lsm6 other upstream 2080423 17896535 ~ 17898546 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other upstream 2368224 17551473 ~ 17610745 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other downstream 161839 20142461 ~ 20145856 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other downstream 261196 20241818 ~ 20243349 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 1340840 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1610255 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1651593 21632215 ~ 21635052 (+)

Expression


Co-expression Network