G4713


Basic Information

Item Value
gene id G4713
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19938019 ~ 19938401 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6683
AGAGACTTCAATGACTTTAACgatcggacaacgtgaactgaaaacacacaggactaaatacacgagGAAATTAACtcaattaacaagacacggctgcagacaattaAACAGCTAAACAcgaagggaaggcagggcacagatagcacgtggcacgagacaaaacaacaacaaaagtccagatatGTGACAGAatgcccccctcccggaaggtgcgtcctcgcacccaaagtaacaaccaaaaaaaaaaaaaaaaacataactcgGAACTGgggataccggatcttgggaggaggttccggtggaggacggcccccaggagggggcaagcagacaggagtccaggggggcacagaaggagggaggagccagggaggacacaggag

Function

GO: NA

KEGG:

id description
ko03450 Non-homologous end-joining

RNA

RNA id representative length rna type GC content exon number start site end site
TU6683 True 383 lncRNA 0.28 1 19938019 19938401

Neighbor

gene id symbol gene type direction distance location
adra2c adra2c,LOC107552592,LOC107671617,LOC107712015,LOC107752971,LOC107556512,LOC107674202 coding downstream 21687 19911680 ~ 19916332 (-)
hmx1 LOC107671606,LOC107712016,LOC107556513,LOC107674270,LOC107552587,LOC107752954 coding downstream 55295 19881125 ~ 19882724 (-)
hmx4 hmx4,LOC107712017,LOC107552578,LOC107671594,LOC107674271,LOC107752946,LOC107556514 coding downstream 58368 19878191 ~ 19879651 (-)
clgn clgn,LOC107551136,LOC107671330,LOC107712024,LOC107737082,LOC107674239,LOC107556507 coding downstream 152372 19777091 ~ 19785647 (-)
maml3 maml3,LOC107674228,LOC107737085,LOC107712021,LOC107556508,LOC107671314 coding downstream 180663 19665097 ~ 19757356 (-)
dok7b dok7,LOC107749932,LOC107679881,LOC107674231,LOC107714234 coding upstream 28466 19966867 ~ 19984964 (-)
rgs12b rgs12b,LOC107749922,LOC107556525,LOC107714241,LOC107679871,LOC107674230,LOC107551217 coding upstream 56789 19995190 ~ 20032019 (-)
htt htt,LOC107679870,LOC107551186,LOC107674220 coding upstream 95581 20033982 ~ 20064155 (-)
trnae-cuc_3 NA coding upstream 158554 20096955 ~ 20097026 (-)
trnam-cau NA coding upstream 174349 20112750 ~ 20112821 (-)
G4671 NA non-coding downstream 1260 19936390 ~ 19936759 (-)
G4609 zgc:194443,LOC107559638,LOC107737093,LOC107559639,LOC107674248,LOC107552058,LOC107551053,LOC107551042 non-coding downstream 128388 19598210 ~ 19809631 (-)
G4615 NA non-coding downstream 305766 19631098 ~ 19632253 (-)
G4611 NA non-coding downstream 326504 19608383 ~ 19611515 (-)
G4607 NA non-coding downstream 357158 19579564 ~ 19580861 (-)
LOC122345298 NA non-coding upstream 217263 20155664 ~ 20157523 (-)
G4870 NA non-coding upstream 261594 20199995 ~ 20265069 (-)
LOC122345304 NA non-coding upstream 326884 20265285 ~ 20266183 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 504551 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 521140 20459541 ~ 20460184 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 398873 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2057602 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2173287 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2501312 17434717 ~ 17436707 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 3489500 16447088 ~ 16448519 (-)
si:dkey-9i23.16 NA other upstream 198634 20137035 ~ 20140579 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 350916 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 428728 20367129 ~ 20369111 (-)
G4958 NA other upstream 745441 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 967769 20906170 ~ 21410571 (-)

Expression


Co-expression Network