G4852


Basic Information

Item Value
gene id G4852
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20459499 ~ 20460183 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6885
attataatgggcctaaaaatagattttctgtatgtaaaatataattttatataactttCGGGGTGAAATAGGACCTGATGAATACAACGCAATCACTTAAGTATAAACCGTCAAAATAGATCCCTTTTGATTGGTTTGTAAATTAAGTTAGCTCTTCGAAATGGTGCATATATAATTGTGCATTAccgttttttccttttcattttagatATGCAGTAAACTGTTTCAAAAAACGAATTCATGTGCATATGCTGCTGTGGGCCAAAATAGTTACATGAGCATATTTAGATGTCAAAAGTTCAAACCTATGCAGGAGGgccaatgaaaacaacaaaagagtgtAAAGAATAAGTAACATTACAGCTGGTACATTCAAGCTACTTTCtctgcgtttttttttaagtctaagATTAAATGCCACACACTGTTTTATTACACACGGAGCAAACTCTTCCAGTAATGCATGCAAACTGATTATTGATGATCAGGTACACCACAGCAAGCCATGAACATTACAGGCTCCATGACTGTAATTATAAAgatttcattctttttctgtgaaaattaaaaatataaatgatgaaattgcattgaaaatggatcaaaatcaatttctgtcgttaatgttgttttgtaaaGTTCATGTCAGTAAAATTAAACACTTCTCCATTTCTTTGGTATGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6885 True 685 lncRNA 0.42 1 20459499 20460183

Neighbor

gene id symbol gene type direction distance location
si:ch73-109d9.3 LOC107730528,LOC107551616,LOC107664580,LOC107674213,LOC107746741,LOC107556809 coding upstream 427 20455020 ~ 20459072 (+)
si:ch73-109d9.2 LOC107674212,LOC107746722,LOC107556810,LOC107730527,LOC107664578 coding upstream 4620 20451158 ~ 20454879 (+)
vwa11 LOC107730535,LOC107556812,LOC107674268 coding upstream 14703 20433004 ~ 20444796 (+)
slc43a3a slc43a3a,LOC107746630,LOC107674217,LOC107730523,LOC107664567,LOC107551582 coding upstream 45974 20406419 ~ 20413525 (+)
cryba1l2 cryba1l2,LOC107556821,LOC107664562,LOC107674250,LOC107551533,LOC107746552 coding upstream 104265 20351650 ~ 20355234 (+)
si:ch73-109d9.1 LOC107556808,LOC107746687,LOC107551630,LOC107664569,LOC107730521,LOC107674214 coding downstream 936 20461119 ~ 20470161 (+)
zgc:66472 LOC107730520,LOC107664577,LOC107551622 coding downstream 10116 20470299 ~ 20476282 (+)
si:dkey-22i16.9 NA coding downstream 116662 20576845 ~ 20580374 (+)
scpp9 LOC107674192 coding downstream 120869 20581052 ~ 20582782 (+)
odam LOC107674208,LOC107556797,LOC107746942,LOC107552703,LOC107664548 coding downstream 125841 20586024 ~ 20587825 (+)
G4820 NA non-coding upstream 41779 20357940 ~ 20417720 (+)
LOC122345303 NA non-coding upstream 55241 20401851 ~ 20404258 (+)
G4829 NA non-coding upstream 80167 20377325 ~ 20379332 (+)
G4823 NA non-coding upstream 92916 20365859 ~ 20366583 (+)
G4817 NA non-coding upstream 105152 20353978 ~ 20354347 (+)
G4853 NA non-coding downstream 154 20460337 ~ 20460568 (+)
G4976 NA non-coding downstream 260096 20720279 ~ 20721036 (+)
G4984 ctnna2 non-coding downstream 468114 20928297 ~ 20930642 (+)
G4991 NA non-coding downstream 557037 21017220 ~ 21020726 (+)
G4996 NA non-coding downstream 616856 21077039 ~ 21077896 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 216150 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 313643 20142461 ~ 20145856 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 682449 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 937100 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 2174855 18247250 ~ 18284644 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 861279 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1130694 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1172032 21632215 ~ 21635052 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 2380505 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 3082881 23543064 ~ 23554625 (+)

Expression


Co-expression Network