timm10 (timm10,LOC107674252,LOC107746912,LOC107556822)


Basic Information

Item Value
gene id timm10
gene name timm10,LOC107674252,LOC107746912,LOC107556822
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20367129 ~ 20369111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6966
AGGGTCCACGTGGGTACTTCCTCCGGTCAAGCGCGCTCATTGAAGGTTAAGCAAGCTGTCAGAACTCTTTGTTGAACGAGACCCACGCGTTGTCCGGTGGGTTTTTAGTGAGGGTTAACCGAAAGGTTGTTCGCAGAGATGGATCCCATGAAAGCGCAGCAGCTCGCCGCGGAGCTGGAGGTTGAAATGATGGCTGACATGTATAACCGAATGACCAATGCATGCCACAGGAAGTGTGTTCCACCTCATTACAAGGAGGCAGAACTTTCAAAGGGGGAAGCTGTGTGTTTGGACCGCTGTGTGGCCAAATACTTGGACTTGCATGAGAGACTTGGTCGGAAGCTCACTGAGCTCTCTGTTCAGGATGAGGAGGTGATGAGGAAGGCCGCTGCAGGCACCGGATAGACCCCTGCAGACTCTGGACATCGGGCTGCATGGCTACGGATATAAACAATATATCATGAATATGAACAGTATTGTGACAAATATTGATCCGCTGATAGACGTGCCACTTAAAGATCAAGACTTTGGAAGGAGGTGGGGTATATATGCTCTGAGTCATTAGTAGTTTGTTGgcatttacattattaacatCGTTTGTTTGGGTAGGGTGATTTGTGAAGCATTGTGAAATTGTGTTCTTGTGAACTTTTTTATGTTGACACTGATCATTGTAATTTCTGAGTCATTTTACAAAGTGTACCTTTATTGCGcaatagaattaaaatg
>XM_043239275.1
CAATTTGCTGGATGGGTAGGGTCCACGTGGGTACTTCCTCCGGTCAAGCGCGCTCATTGAAGGTTAAGCAAGCTGTCAGAACTCTTTGTTGAACGAGACCCACGCGTTGTCCGGTGGGTTTTTAGTGAGGGTTAACCGAAAGGTTGTTCGCAGAGATGGATCCCATGAAAGCGCAGCAGCTCGCCGCGGAGCTGGAGGTTGAAATGATGGCTGACATGTATAACCGAATGACCAATGCATGCCACAGGAAGTGTGTTCCACCTCATTACAAGGAGGCAGAACTTTCAAAGGGGGAAGCTGTGTGTTTGGACCGCTGTGTGGCCAAATACTTGGACTTGCATGAGAGACTTGGTCGGAAGCTCACTGAGCTCTCTGTTCAGGATGAGGAGGTGATGAGGAAGGCCGCTGCAGGCACCGGATAGACCCCTGCAGACTCTGAGGGTGGGGCTAAAGGCCCGTGGATGGGGTTTGTGGGCACTCTGGACATCCAAAGGGGGACATCGGGCTGCATGGCTACGGATATAAACAATATATCATGAATATGAACAGTATTGTGACAAATATTGATCCGCTGATAGACGTGCCACTTAAAGATCAAGACTTTGGAAGGAGGTGGGGTATATATGCTCTGAGTCATTAGTAGTTTGTTGgcatttacattattaacatCGTTTGTTTGGGTAGGGTGATTTGTGAAGCATTGTGAAATTGTGTTCTTGTGAACTTTTTTATGTTGACACTGATCATTGTAATTTCTGAGTCATTTTACAAAGTGTACCTTTATTGCGcaatagaattaaaatgtttaccaTTC

Function

symbol description
timm10 Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in membrane and mitochondrion. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Predicted to be active in mitochondrial inner membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; optic tectum; and pectoral fin bud. Orthologous to human TIMM10 (translocase of inner mitochondrial membrane 10).

NR:

description
PREDICTED: mitochondrial import inner membrane translocase subunit Tim10

GO:

id name namespace
GO:0045039 protein insertion into mitochondrial inner membrane biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10

RNA

RNA id representative length rna type GC content exon number start site end site
TU6966 False 729 TUCP 0.46 3 20367139 20369094
XM_043239275.1 True 814 mRNA 0.47 2 20367129 20369111

Neighbor

gene id symbol gene type direction distance location
unc93b1 unc93b1,LOC107730513,LOC107664560,LOC107746565,LOC107674251 coding downstream 578 20355235 ~ 20366551 (-)
crybb1l2 crybb1l2,LOC107551523,LOC107674249,LOC107730514,LOC107556820,LOC107746545,LOC107664576 coding downstream 18379 20344955 ~ 20348750 (-)
rtn4rl2a rtn4rl2a,rtn4rl2,LOC107746539,LOC107674267,LOC107556816,LOC107551512 coding downstream 35541 20327111 ~ 20331588 (-)
med19b med19b,med19,LOC107551486,LOC107730510,LOC103047628,LOC108412480 coding downstream 83240 20281288 ~ 20283889 (-)
ssrp1b ssrp1,ssrp1b,LOC107746478,LOC107664573,LOC107674244 coding downstream 125275 20230590 ~ 20241854 (-)
LOC122344866 NA coding upstream 420 20369531 ~ 20376584 (-)
ctnnd1 ctnnd1,LOC107664559,LOC107746596,LOC107674216,LOC107730519 coding upstream 8206 20377317 ~ 20401716 (-)
cabp2a cabp2a,LOC107556818,LOC107551591,LOC107730525,LOC107674218,LOC107746641,LOC107664568 coding upstream 44480 20413591 ~ 20427811 (-)
LOC122345104 LOC107552254,LOC107664557,LOC107730505 coding upstream 61697 20430808 ~ 20434371 (-)
LOC122344926 LOC107730532,LOC107664579,LOC107674210,LOC107746658,LOC107556811 coding upstream 76021 20445132 ~ 20450119 (-)
LOC122345304 NA non-coding downstream 100946 20265285 ~ 20266183 (-)
G4870 NA non-coding downstream 102060 20199995 ~ 20265069 (-)
LOC122345298 NA non-coding downstream 209606 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 428728 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 430370 19936390 ~ 19936759 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 73841 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 90430 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 97051 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 244805 20613916 ~ 20702298 (-)
LOC122349798 NA non-coding upstream 334365 20703476 ~ 20718890 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 54181 20289317 ~ 20312948 (-)
si:dkey-9i23.16 NA other downstream 226550 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 827983 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2486712 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2602397 17745837 ~ 17764732 (-)
G4958 NA other upstream 314731 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 537059 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1180506 21549617 ~ 21564077 (-)
G5104 NA other upstream 1349028 21718139 ~ 21766284 (-)
G5108 NA other upstream 1355276 21724387 ~ 21772762 (-)

Expression


Co-expression Network