G4924 (LOC107556812,LOC107674268,LOC107730535,LOC107552263)


Basic Information

Item Value
gene id G4924
gene name LOC107556812,LOC107674268,LOC107730535,LOC107552263
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20442952 ~ 20444794 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU6996
AGTacaaatacagtttattttgttaacatttgGAAAGCTGGTTGAGTTTAGATTAcatgttcatgttttaaaatgtcattcatcaTCATTCATTGCGCAAAGCACTATAACTTAGCTAAAACATGACCTTATGTTTATTGCACATAACAATCCTTTATGTATTACAACTGTCATTGTCCTGAAGTGTATATTAGGGTTACTGACCTGTAAAATATAGTTTCTTTAAATGGGTATTTAGAAACCATCgtaatatttgtacatttatataacagTTATATGTTAatgatattgaaaatatatgtgACCTCATATGGTTACACAAAATATACCACAATATACATAATTTCTGTGTTTGggcagaaaatataaaattgcagaatgtctatttttacatttttgcaaaattaattttttactgATCATATGAATATTACACTGAACTGGCATATGACAATGAATTAATTTCATGATTCCTGAGTTATATTTTTGCATGGCCTCACAATCTGTATAAGATTTGTAAGATCTGTATAAGCAGCATAGCTCTTTAATGCCGTTTAAACTTAAGCTGGAAATACCAGTAAAGGAAGATTTGGGATGAAATGCTTTGTAATTTGAGAGCTCTAAGAATGGGATGAGAAAGAGAAGGATGGGACGACTGTGTTTGGCTGGATGAACTCCATTTCACTACAGAAACAAGGCATCACGTAGGAAACCGTATAAAAGCAGAGATGCCCACAGAGGGAGGGACATGCTGATAAGACGTGAGCCTGCGCTGGACTTAATGGTGTAACTGCACCTGCCCACGTTCCCTACTTTGTCAACTGCAGACAAAGTCACAGATGGTGAACAACATGAGGCCTCGTACAGACCCATCACCACGATCACACCGTCTTCCACTTCCCTCTGGGTGAAGTTTCCACTGCCTTGCTGGATAGAAATGCTCTCGATGCCTGTGCCGTTACCGTCTGTGATGTTGACGGAGAGTTCCCAGTTTGATGAGCTGCAAGACGACGAGTAACAAATACCCTGTACATCGGTAATTTCACATTTTGGAGGTGTGAGGTCTGTTACCTTGGAGAGAACAGAAAGGCGAAGGACAACATAGTTAGAGTCACTTCCTCCAGGGCCTTCTGCCTCAATGGTTAGCGTAACATCTGTTCCTGAGACCGTATCAGCAGGTGGAGTGAGAGACACTGTCCCCTGAGCGCTGCCACCACTCACGAGACTGAGC

Function

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 7-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6996 True 1231 lncRNA 0.40 2 20442952 20444794

Neighbor

gene id symbol gene type direction distance location
LOC122345104 LOC107552254,LOC107664557,LOC107730505 coding downstream 8581 20430808 ~ 20434371 (-)
cabp2a cabp2a,LOC107556818,LOC107551591,LOC107730525,LOC107674218,LOC107746641,LOC107664568 coding downstream 15141 20413591 ~ 20427811 (-)
ctnnd1 ctnnd1,LOC107664559,LOC107746596,LOC107674216,LOC107730519 coding downstream 41236 20377317 ~ 20401716 (-)
LOC122344866 NA coding downstream 66368 20369531 ~ 20376584 (-)
unc93b1 unc93b1,LOC107730513,LOC107664560,LOC107746565,LOC107674251 coding downstream 76401 20355235 ~ 20366551 (-)
LOC122344926 LOC107730532,LOC107664579,LOC107674210,LOC107746658,LOC107556811 coding upstream 338 20445132 ~ 20450119 (-)
cisd2 cisd2,LOC107552739,LOC107746991,LOC107556804 coding upstream 248471 20693265 ~ 20695767 (-)
LOC122349971 lrrtm2,LOC107680618,LOC107750357 coding upstream 936907 21381701 ~ 21384924 (-)
LOC122348874 LOC107552383 coding upstream 967069 21411863 ~ 21415844 (-)
LOC122342190 LOC107689477,LOC797212,LOC107682957 coding upstream 1094972 21539766 ~ 21548066 (-)
LOC122345304 NA non-coding downstream 176769 20265285 ~ 20266183 (-)
G4870 NA non-coding downstream 177883 20199995 ~ 20265069 (-)
LOC122345298 NA non-coding downstream 285429 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 504551 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 506193 19936390 ~ 19936759 (-)
G4930 NA non-coding upstream 14747 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 21368 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 169122 20613916 ~ 20702298 (-)
LOC122349798 NA non-coding upstream 258682 20703476 ~ 20718890 (-)
G5047 NA non-coding upstream 1168124 21612918 ~ 21620581 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 73841 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 130004 20289317 ~ 20312948 (-)
si:dkey-9i23.16 NA other downstream 302373 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 903806 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2562535 17811459 ~ 17880417 (-)
G4958 NA other upstream 239048 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 461376 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1104823 21549617 ~ 21564077 (-)
G5104 NA other upstream 1273345 21718139 ~ 21766284 (-)
G5108 NA other upstream 1279593 21724387 ~ 21772762 (-)

Expression


Co-expression Network