G5047


Basic Information

Item Value
gene id G5047
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21612918 ~ 21620581 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7183
AACTTGGCAACTTTATTTACAATTCAAGTCAGTCACATGcaacatattttaatgaatgtaacacaaaattagcgtaaggaaaaaaaaaagcgtctttgcatttttttttaattttcttcaaaatgttgattaaatatacaaaaatatagttTACAAATACTGTACAGAAAATATTCTGCTGCAGAATTCTTACTTTTACAAACATGTTTGTGAGATTCACAAACATTAGCAGTGTTAAAACGAGACTGTGGTGAGAAGGGGTGGGGCTCGTGTTTACATCTGTGAGGTCACAATAATGAGGGGTGGAGCAAGATTAGGTAAAGATCAGAATGAGGTGAGGAGCTGAAAGGATGTCCAATTGTCACAGCGGTTCATTGGCAGTTCAGTTTTGAtagaaattatacaaatatttcaattacaTCATGTGCCTTAGTGACTCTTTCTATCTTTACAGAATTACTGCCAATATCTTCCCAACAGACTTTTTTTCCCACAATAAAATCTTTTATCTAGTCTAAAAAGCCTTTTAGGAACAAACAGAAGTTGCAATTTTGCCTTTTCAGACTATAACTGGTCGACCAAATATGGCACTCACAGTAATGATCAGTAGAAAAACAATAgttttgagcaaaaaatgtAACCTATCGCTCCagtataaacacttatttgacCTCCAGTTTTCTAGATATGTTGTGAAACAGTTTTTAACAATCCCCACAAAGCCTTAATCTGCATTAGCACTAACGTAGAGCTGTTAAAAAGTACTACTGAAATGTTACGGGTTTTAAACGTAAGCacacaataaataactttttttttttctttttcttttttttgccccATTTCAGTTCCGCCTCTAAGCAGAGGCCGCCAAAACGGAAGAATATGAAAAAGTGCAGTAATGTAATTCTTGATTTTAGACACAATCGACTACTTTCACATTATATTGACACGGTTGAACCACAGCTCTCCATATGCATACATTCGTGATCAGAGTGACTCTTTAAGACCCGCTGTGTTACAAACGCCACAGAGACGAAAGAGAGATCCTAATTTAGGACTCGACAGTATTTGTCCATGATAAGGAATAACAAGTCTAAAGGAGACCCTCagtgttatacattttttgttaagACAGTACCAGAGCAAACCAagttaacaaagaaaaaaaagccgaAAGAAATGTCTTTTCGTTTCTTCACACACTCAGCATATGCAAAcgaaagttaaaataaattaaaattaaataagctCTTGATTCACAATCTGTGTCTAGCCTtcgaaaaaaaaacacaaagatacATTTCAGAATGTGGTGGGCAGTTTGCTTGGCAATGAATGGGTAGTAAACCATTTAATCGGCACTTCGAACCTAACCAGCGCTGATTTAGTTTAATTCTGCTTGTTTTCACATCTGGCATCGCTTGTGGTGTTGCGGCCagcacatttacaaaatatcataCACATTTCCCTTCTAGAGTGGCTTAACACGGAGGGCTCAGAGACCCCGCCGGACCCCTGTGGCAGGTTGCTGGGATGACCCTGCAAAATAGCGGTATAATAGAGCAGGAAAGAGCCAGAGCTTCTATTATATTACAAAGAATAAAGAGCGGCCTTTCCTGCTGACTGAATCCACCTGCTGCTCATTGATCTTAATGGCTGAGGATTCTGCGTTGTGCTGGAAGATGCTGGAATGATActagattgtgtgtgtgtgtgtgacttcaGGTCAAATCTCAGTTTGTTCCTGTAGCCCGTCTAGTTTGATTTGCCTCACTAGAGaggcatttaatttattaatatttcttggGAGACAGATCTGGGGCTTTATGCCAAGTATATTTTCAGAAAGCTATGCAGCACAATATGAGAGCCAGtacgaacacaaacacacacacacacacgcgcacacatagGCTGTTTTGCATAGAGCTACAGCTTCGCGTGAGATTTGTAATGTCtaagaaaatataatacatcTCAGCAGTACCTGGCGAATAAATAGTAATTCATAAAAAGACAAACTCGGGACATTTTGTTCggtttaaatttgtttaaaagccCTCATTTAATTTGCAACTATTTCCATTAGTTCTGTAACACATCTGTAAAAAAACGTAAGACTCGTTGTGCCAGAAACTGACTAATACTTTAACTATGAAGGGGTTTAGAGCAGTAAGTTTTGGCAGGCATAATATGATTTGCATCTagaaattaaacatattaaatttgttaaataaattgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatataaatatatatatatatatatatatatcagtgctatcaaactattaatcatgattaatcacattcaaaataaatgtttttgtttgcataatatatgggtgtgttctgtgtatatttttatgtataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7183 True 2441 lncRNA 0.35 2 21612918 21620581

Neighbor

gene id symbol gene type direction distance location
smox smox,LOC107689473,LOC107551688,LOC107551695,LOC107692173 coding downstream 35549 21568102 ~ 21577369 (-)
LOC122342190 LOC107689477,LOC797212,LOC107682957 coding downstream 64852 21539766 ~ 21548066 (-)
LOC122348874 LOC107552383 coding downstream 197074 21411863 ~ 21415844 (-)
LOC122349971 lrrtm2,LOC107680618,LOC107750357 coding downstream 227994 21381701 ~ 21384924 (-)
cisd2 cisd2,LOC107552739,LOC107746991,LOC107556804 coding downstream 917151 20693265 ~ 20695767 (-)
fbxo41 fbxo41,LOC107689471,LOC107692170,LOC108260496 coding upstream 1784 21622365 ~ 21663567 (-)
LOC122342104 LOC107689469,LOC107551743,LOC107719777,LOC797711,LOC107711522,LOC107567046,LOC107692200 coding upstream 55506 21676087 ~ 21679530 (-)
mogs mogs,LOC107719770,LOC107689467,LOC107551727,LOC107567052,LOC107692169 coding upstream 66646 21687227 ~ 21691373 (-)
si:dkey-56e3.3 LOC107719778,LOC107689468,LOC107552374 coding upstream 87357 21707938 ~ 21712568 (-)
LOC122337558 LOC107552383 coding upstream 92946 21713527 ~ 21734713 (-)
LOC122349798 NA non-coding downstream 894028 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 910620 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1143903 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1152734 20459541 ~ 20460184 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding downstream 1168124 20442952 ~ 20444794 (-)
G5327 NA non-coding upstream 423321 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 727933 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 791881 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 814032 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 824377 22444958 ~ 22446648 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 48841 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 202347 20906170 ~ 21410571 (-)
G4958 NA other downstream 926178 20683842 ~ 20686740 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 1243807 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 1299970 20289317 ~ 20312948 (-)
G5104 NA other upstream 97558 21718139 ~ 21766284 (-)
G5108 NA other upstream 103806 21724387 ~ 21772762 (-)
LOC122348907 NA other upstream 141300 21761881 ~ 21799744 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 638858 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 652237 22272818 ~ 22287521 (-)

Expression


Co-expression Network