G5366


Basic Information

Item Value
gene id G5366
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22348514 ~ 22382972 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU7696
TACAATCCTTAAATATGTCAGCTCATTgaagaaaaactaaagaaaacacTCTATTGATCGTAAATTCTCTTTCTGCTCTAGCTGAGGACGTGATATTCACTCGCTTGTCAGGGAGACTCCagtagtttttgtgtgtgtgtgtgtgtgcgtgcaggaAGTTCCAGGGAAAGACGCAAACGGACTTGATGTGAGTGACTGCATAGTGAGTATTTGGTTTAATTACAGATGGGGCATCatgataatttaacaaaataataacaataacaacaattcTAAAAAGTAATAAAGACTTAAAAATCATGACGGCACGAGTACACGCCTGAGCActcacacacgcaaacacaccaAAAATAACAGTGATgctgcaacacaaacacacacactcactcacacgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagag
>TU7704
TACAATCCTTAAATATGTCAGCTCATTgaagaaaaactaaagaaaacacTCTATTGATCGTAAATTCTCTTTCTGCTCTAGCTGAGGACGTGATATTCACTCGCTTGTCAGGGAGACTCCagtagtttttgtgtgtgtgtgtgtgtgcgtgcaggaAGTTCCAGGGAAAGACGCAAACGGACTTGATGTGAGTGACTGCATAGTGAGTATTTGGTTTAATTACAGATGGGGCATCatgataatttaacaaaataataacaataacaacaattcTAAAAAGTAATAAAGACTTAAAAATCATGACGGCACGAGTACACGCCTGAGCActcacacacgcaaacacaccaAAAATAACAGTGATgctgcaacacaaacacacacactcactcacacgcgcacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacagag

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU7696 False 471 lncRNA 0.50 2 22348514 22382972
TU7704 True 475 lncRNA 0.41 2 22348514 22382972

Neighbor

gene id symbol gene type direction distance location
c1h19orf67 LOC107712227,LOC107676872,LOC107561872 coding downstream 12222 22332974 ~ 22336292 (-)
serhl serhl2,LOC107603032,LOC107718629,LOC107692145,LOC107561867 coding downstream 55153 22288682 ~ 22293361 (-)
LOC122348711 atf7ip,LOC107712238,LOC107676868,LOC107692147 coding downstream 77780 22240381 ~ 22270734 (-)
grin2bb grin2bb,grin2b,LOC107676879,LOC107551907,LOC107692185,LOC107603025,LOC108258482 coding downstream 112992 22146210 ~ 22235522 (-)
si:ch211-243a20.4 NA coding downstream 212479 22132862 ~ 22136035 (-)
pnpla6 pnpla6,LOC107712242,LOC107676850,LOC107718547,LOC107692140 coding upstream 2541 22385513 ~ 22411698 (-)
cdadc1 LOC107676859,LOC107560988,LOC107718418,LOC107603039,LOC107692129,LOC107746266 coding upstream 311858 22694830 ~ 22700547 (-)
rcbtb1 rcbtb1,LOC107676891,LOC107746269,LOC107560987,LOC107718354 coding upstream 318359 22701331 ~ 22709814 (-)
ebpl ebpl,LOC107718395,LOC107746301 coding upstream 328755 22711727 ~ 22714547 (-)
kpna3 kpna3,LOC107746270,LOC107560982,LOC103046682,LOC107676880 coding upstream 332553 22715525 ~ 22730884 (-)
G5327 NA non-coding downstream 304377 22043902 ~ 22044137 (-)
G5047 NA non-coding downstream 727933 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1629624 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1646216 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1879499 20466162 ~ 20469015 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 29490 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 51641 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 61986 22444958 ~ 22446648 (-)
G5404 NA non-coding upstream 143144 22526116 ~ 22526422 (-)
G5405 NA non-coding upstream 143669 22526641 ~ 22526865 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other downstream 19585 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other downstream 60993 22272818 ~ 22287521 (-)
LOC122348907 NA other downstream 548770 21761881 ~ 21799744 (-)
G5108 NA other downstream 575752 21724387 ~ 21772762 (-)
G5104 NA other downstream 582230 21718139 ~ 21766284 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 156712 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 481859 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 530928 22913900 ~ 22916405 (-)
gja5b cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072 other upstream 635266 23018238 ~ 23030310 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other upstream 1388052 23771024 ~ 23916448 (-)

Expression


Co-expression Network