G55


Basic Information

Item Value
gene id G55
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 393639 ~ 393899 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU85
GTTTATTTACATCTTTTGTAATAGTCTTGTggttaagtctttttttttgttcttttcatatctttattatattttatcgcTATATTGTGATTACTGGAAAATTCTCTCAATCCAGTTCTAGTATAATTGAGGTATTTATTGACTGTTtcttgcatgtgtgttttaggCCCTGTATGAGAAGGCTAGCTGTTATGATATCCTGGTGGTGGTGTTTGGAGCACGAGGTGTGGACTGCCGTCTGATCACTTACTCCACTGGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85 True 261 lncRNA 0.36 1 393639 393899

Neighbor

gene id symbol gene type direction distance location
LOC122337612 cd38,LOC107568972,LOC107693813 coding downstream 173956 567855 ~ 592341 (+)
LOC122342042 LOC107746594,LOC107582328,LOC107686751 coding downstream 335172 729071 ~ 738922 (+)
LOC122341978 NA coding downstream 649284 1043183 ~ 1047811 (+)
ggact.3 NA coding downstream 649286 1043185 ~ 1045789 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding downstream 851264 1245163 ~ 1250334 (+)
G21 NA non-coding upstream 187289 206113 ~ 206350 (+)
G12 NA non-coding upstream 205491 187799 ~ 188148 (+)
G8 NA non-coding upstream 237293 155927 ~ 156346 (+)
LOC122351887 NA non-coding upstream 320898 71631 ~ 72741 (+)
G69 NA non-coding downstream 48000 441899 ~ 442197 (+)
LOC122348617 NA non-coding downstream 72021 465920 ~ 466854 (+)
LOC122348571 NA non-coding downstream 80140 474039 ~ 475160 (+)
G84 NA non-coding downstream 222265 616164 ~ 622738 (+)
G120 NA non-coding downstream 491619 885518 ~ 888363 (+)
G10 NA other upstream 215439 177716 ~ 178200 (+)
LOC122341994 NA other downstream 52041 445940 ~ 449640 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other downstream 725820 1119719 ~ 1120721 (+)
LOC122327253 NA other downstream 1045141 1439040 ~ 1441666 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 1791922 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 2089741 2483640 ~ 2489103 (+)

Expression


Co-expression Network