G6058


Basic Information

Item Value
gene id G6058
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24872629 ~ 24873541 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU8826
CTCGGCCTCTGATGGCTTGGCGGCGGTCAGGAGCTTCTCCAGCTCTGTGTGCATGGACTTCTCATGCTGCTGTCTCAGCTTCTCCTGAAACTCCGCCATCCCTGCATTAGGGCTGTTTCTGTACAGATCTACACAGAGGAAAGAAAACAGCAACAAAAGACATGATTAAAACCCTCTTAAAAACCAGTACACATCAACCCTGAATTGAATTCAGCAGTCCACTGTTGAATAGTTTCTTCTTTCGCACTGGTACAACTACAAGCGCATCAGTGTAGAGGAAGCGCTCAAAAAGATGCTTTGAGATCTACTCATGAAGAGAAGCTACTAAAACTTCAGCGTTCAGAACAGTGCGCCCTGCTCCCAGACGTGATTTCAGGAAGATTCCCGGACTGTCGCGTCCCGCACAGGACACCCGATCGGGGCTTTGTAACGCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8826 True 437 lncRNA 0.49 2 24872629 24873541

Neighbor

gene id symbol gene type direction distance location
gprin3b LOC107729386,LOC107594421,LOC107675731,LOC107583186,LOC107757021,LOC107684268 coding downstream 60459 24806784 ~ 24812170 (-)
zgc:154142 zgc:154142,LOC107676135,LOC107594422 coding downstream 70204 24785279 ~ 24802425 (-)
fam13a fam13a,LOC107757018,LOC107684269,LOC107594423,LOC107675741 coding downstream 88177 24743634 ~ 24784452 (-)
col17a1a LOC107684270,LOC107594448,LOC107583183,LOC107729338 coding downstream 165452 24690982 ~ 24707177 (-)
tsga10 tsga10,LOC107729387 coding downstream 198084 24665838 ~ 24674545 (-)
spast LOC107749266,LOC107675648,LOC107757022 coding upstream 9859 24883400 ~ 24891467 (-)
psen2 psen2,LOC107675694,LOC107684264,LOC107757025 coding upstream 22300 24895841 ~ 24902227 (-)
jag1a jag1a,LOC107675628,LOC107594417,LOC107747432 coding upstream 49655 24923196 ~ 24951265 (-)
esf1 esf1,LOC107757029,LOC107747407,LOC107684260,LOC107675607 coding upstream 103499 24977040 ~ 24984030 (-)
LOC122329700 sgms2,LOC107729360,LOC107675923,LOC107594470,LOC107684311,LOC107757011 coding upstream 261355 25134896 ~ 25138647 (-)
LOC122345669 LOC107684322,LOC107676340,LOC107594467,LOC107756997,LOC107583244 non-coding downstream 9255 24840914 ~ 24863374 (-)
G6049 NA non-coding downstream 59106 24813313 ~ 24813523 (-)
G6019 NA non-coding downstream 182933 24689178 ~ 24689696 (-)
G5780 NA non-coding downstream 311176 24560839 ~ 24561453 (-)
G5769 NA non-coding downstream 320749 24551583 ~ 24551880 (-)
G6061 NA non-coding upstream 37600 24911141 ~ 24913468 (-)
G6077 NA non-coding upstream 113443 24986984 ~ 25204897 (-)
G6081 NA non-coding upstream 124111 24997652 ~ 24998787 (-)
G6082 NA non-coding upstream 134367 25007908 ~ 25009573 (-)
G6091 NA non-coding upstream 206455 25079996 ~ 25081855 (-)
G6056 NA other downstream 2164 24868441 ~ 24870465 (-)
LOC122341607 LOC107729348,LOC107676039,LOC107578077,LOC107729356,LOC107594453,LOC107676194,LOC107729349,LOC107706808 other downstream 575038 24291431 ~ 24297591 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other downstream 621390 24193721 ~ 24251239 (-)
si:dkeyp-80c12.8 NA other downstream 651183 24218594 ~ 24221446 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other downstream 789753 24061440 ~ 24082876 (-)
G6073 NA other upstream 98950 24972491 ~ 24973371 (-)
G6074 LOC107583193,LOC107757030,LOC107747412 other upstream 115235 24988776 ~ 24993345 (-)
G6078 kif16b,LOC107747412,LOC107583193 other upstream 120942 24994483 ~ 24995820 (-)
LOC122349000 gstcd,LOC107757010,LOC107676029,LOC107729368,LOC107594450,LOC106610363,LOC107684312 other upstream 151181 25024722 ~ 25063882 (-)
G6085 hadh,LOC107594428,LOC107729339 other upstream 252510 25126051 ~ 25127824 (-)

Expression


Co-expression Network