G6074 (LOC107583193,LOC107757030,LOC107747412)


Basic Information

Item Value
gene id G6074
gene name LOC107583193,LOC107757030,LOC107747412
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24988776 ~ 24993345 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU8856
TCGATTCCTCTGGATCCCAGCGCAGAGAGTCTTAAAGATCCGGTGAAGATCAGTATTCCCCGTCACGTCCTGTGCGGTCAGGGAAAAGATGAACACTTCGAGTTCGAAGTCAAGATCGCGGTGTTGGATGAGACGTGGACGGTGTTCAGAAGATACAGTCGCTTTCGGGAGATGCACAAATCTCTGAAGCTGAAATATCCAGAGCTTGCGGCTTTGGACTTCCCTCCCAAAAAGATTTTCGGGAACCGAGATGAGAGAATGGTCGCGGAGCGCAGGAATCAGTTGGAGCGATACCTGCGGAGCTTCTTCTGCGTGATGATGtccccctcctcctcttctccccTGAGGACGGACGAGTGTGGACTACACCTCTCAAAGCACGCCGTGTGCAGCATCTCTCCTTTCTTCAAGAAGGGAGTGTTTGACTACAGCAGTCACGGGACGGGCTGATACGCTCTCATTTACATATACTCAAAACAAAAACGATACATTCGAAAAagtatattatgcatataaaaaaaaaatcgagcTTGATTTTGGAACCATAAAGATTTTTGCATTGCGATTATTTTCGTGGCAATTAAGCGCATTTTTCCAAATCGAATTCTCATATTATGCATATTGAGTTTTTATGAGGTTCTGTGCAGTTGTGGTTCTCGtaatacagaatttttttttaaattctgtattcatattaagaaactttttttttactgttattagtGCTGTCGGATGGCTGatcgtgattaattgctttcaaaataagttttttttgtatgccgtgtatatttattatgtgtatataaatactaacgcgatatgcttatatatttaagaaaaatgttatatttaatatttatgtataatatgaaAGAACATGAGTGTATATAgatgtaaatatgttaaaaatatatactgtatgtctctatttatatatgcgtaataaatatacacagaacacgcgttatgtaaacaaaaattttattttggatgcaaatagtcgtttgacagcactaattatcaGAAAActagtgcaaaaaaaacagtacGACAATACTGCCATGatgtctgaaatgttttatttacattttagagaatttctctaaaatgtgtttttttttttttgccatgaaaataacataaatagGCTTTTTTCCTTTATACTTTgaggtgaaatatgacctgcATTCATTCAGACTTTGATGAATTTGCTCAGGAACGTTGGAAATCGAGAGTAGAGTGGATCCAAAGTAGATGTAGATCATTTTGTTGTGCCTCGTTGGCATTAATTGAGCTTTAAACGCTTCAGCGAATAGGAAATAAGGACTTAATCTGACGGCAGATGCTCGCTGTGTCCTGCTCCAAACGTGTCGTGTTTACGTCGAGGACCACGAAGCCCGTTTCTGTGGACGGACGGGACGTCCCGTAGCTGCTACTTGGGTTTGTGATTCACTTTAAATCGTGTTCGTGTTTAAAGCTGCTGAGTTTAAAGAATCTCCACGAGAACGGAAGCCTGTTCGTAGCTCGCGCGTAACCCCACATTAAATGAACTGCTACTAATATCCGTGATGCTCGGGCTGACCTTGAGCCGTTGTTGTTTTATAACCACTAAGAGGTCAAAGCGCTCAAAATAGCAGGTAAAGTGTGAGCCGGTGTcttccaggaaaaaaaagaatgcttctGATTCAAGACGACTGTCGTAGTCGACCGTTTAAGTAATAACATGTCCATTGACAGCTACTGAACtcttaaaagattcattttCAGCACTATGAAGCCATATGCATACGCAGAATGTATCTGTAAATGTATTGAACACTTGATCTGAGGGGCTTGTTCTCGTGATGTCTGGAGGAAACTAATATACTGCTATATTAGCCGTCGAATACTAGAACGCTTGTTTGCTCTAAAAGAGCGATGCGAGgaagatgtatacattttttaaaacacttttcatttgctttttatttctggaACTGAATGTAATGATTTGTGAGTCACATGATTTGGTAACTCGGTTTTAGAGAGCAACCGTTTAGCACCAtgttaaaatcactgtttatttatgttgGGAGTACAAGCTTTTGCAAAAATACAGTTGATGCAACAATTCTGCGCGTTCGTGTGAGTTGATTTGAGGAGAAAACGTCTTTTCCTTCCTAGGATTTTTCGTTGGTTTTCTGGTGGTCCATCGGAAGTTTGCTTATTTTTGACAGATCGGCAAACGAGACATTCGCCGAACCCCTTTTTGCTGGTTTCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8856 True 2261 TUCP 0.39 4 24988776 24993345

Neighbor

gene id symbol gene type direction distance location
esf1 esf1,LOC107757029,LOC107747407,LOC107684260,LOC107675607 coding downstream 4746 24977040 ~ 24984030 (-)
jag1a jag1a,LOC107675628,LOC107594417,LOC107747432 coding downstream 37511 24923196 ~ 24951265 (-)
psen2 psen2,LOC107675694,LOC107684264,LOC107757025 coding downstream 86549 24895841 ~ 24902227 (-)
spast LOC107749266,LOC107675648,LOC107757022 coding downstream 97309 24883400 ~ 24891467 (-)
gprin3b LOC107729386,LOC107594421,LOC107675731,LOC107583186,LOC107757021,LOC107684268 coding downstream 176606 24806784 ~ 24812170 (-)
LOC122329700 sgms2,LOC107729360,LOC107675923,LOC107594470,LOC107684311,LOC107757011 coding upstream 141551 25134896 ~ 25138647 (-)
LOC122329893 kif16b,LOC107594414,LOC107747412 coding upstream 215432 25208777 ~ 25225402 (-)
spred2a spred2a,LOC107747416,LOC107675542,LOC107757033,LOC107583232 coding upstream 459859 25453204 ~ 25466466 (-)
ppp3r1b PPP3R1,ppp3r1,ppp3r1a,LOC108441257,LOC107727894,LOC107699153,LOC106024317 coding upstream 516229 25509574 ~ 25522370 (-)
cnrip1a cnrip1a,LOC107676313,LOC107684253,LOC107594460,LOC107583248,LOC108258529 coding upstream 530022 25523367 ~ 25526442 (-)
G6061 NA non-coding downstream 75308 24911141 ~ 24913468 (-)
G6058 NA non-coding downstream 115235 24872629 ~ 24873541 (-)
LOC122345669 LOC107684322,LOC107676340,LOC107594467,LOC107756997,LOC107583244 non-coding downstream 125402 24840914 ~ 24863374 (-)
G6049 NA non-coding downstream 175253 24813313 ~ 24813523 (-)
G6019 NA non-coding downstream 299080 24689178 ~ 24689696 (-)
G6081 NA non-coding upstream 4307 24997652 ~ 24998787 (-)
G6082 NA non-coding upstream 14563 25007908 ~ 25009573 (-)
G6091 NA non-coding upstream 86651 25079996 ~ 25081855 (-)
G6104 NA non-coding upstream 260052 25253397 ~ 25258307 (-)
G6118 NA non-coding upstream 290030 25283375 ~ 25427936 (-)
G6073 NA other downstream 15405 24972491 ~ 24973371 (-)
G6056 NA other downstream 118311 24868441 ~ 24870465 (-)
LOC122341607 LOC107729348,LOC107676039,LOC107578077,LOC107729356,LOC107594453,LOC107676194,LOC107729349,LOC107706808 other downstream 691185 24291431 ~ 24297591 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other downstream 737537 24193721 ~ 24251239 (-)
si:dkeyp-80c12.8 NA other downstream 767330 24218594 ~ 24221446 (-)
G6078 kif16b,LOC107747412,LOC107583193 other upstream 1138 24994483 ~ 24995820 (-)
LOC122349000 gstcd,LOC107757010,LOC107676029,LOC107729368,LOC107594450,LOC106610363,LOC107684312 other upstream 31377 25024722 ~ 25063882 (-)
G6085 hadh,LOC107594428,LOC107729339 other upstream 132706 25126051 ~ 25127824 (-)
G6089 cyp2u1,LOC107729355,LOC107583182,LOC107756983,LOC107683164 other upstream 138658 25132003 ~ 25134159 (-)
G6124 actr2,LOC108423375 other upstream 311252 25304597 ~ 25307971 (-)

Expression


Co-expression Network