G6089 (cyp2u1,LOC107729355,LOC107583182,LOC107756983,LOC107683164)


Basic Information

Item Value
gene id G6089
gene name cyp2u1,LOC107729355,LOC107583182,LOC107756983,LOC107683164
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 25132003 ~ 25134159 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU8879
GTGTTTGATCAGCAGATAGCGAGTATTGATCGGGAGGAACTATGCGTCAGTGGATTCGATGAGTGCGCGAGTCATGGACGCTTCTCTGTCTTTGCTGTGGCAGTACGCGTTCTCGCCCGCAAACGTCGTGGGTTTGATTGCGTTCGTGCTCGTTTACTGTGCGCTGCAGCAGTACGCGTGGCATCGGACGTACGCCAACATCCCTCCGGGTCCAAAGCCATGGCCCATCGTGGGAAACTTCGGCGGCTTCCTGGTGCCTTCGTTTATTTTAAGGCGACTCGCGAAGAATCGCAAAGAGTTTTCAAAGATGGTCTCGAATCCGCTGTCGCCTCAGGCTGGACTGATGGAGATGTCCAAACTCTACGGGAAcatattcagcattttttgttGGGCCTCAGCTCATGGTTGTGCTGACGGGATACGACACTGTCCGGGACGCGATGCTAAACCATCCGGAGGTGTTCTCTGACAGACCCCATATACCCCTCGTGACTATTATCACCAAGAGAAAAGGGATCGTGTTCGCCCCCTACGGCCCGCTGTGGCGCACAAACCGTAAGTTCTGTCACAGCACTCTGCGCAGCTTCGGCTTCGGCAAGCTGAGTCTGGAGCCGTGCGTCCACGAAGGCCTGACCATGATTAAAACAGAACTGCAGAGCCTCATCGAAAACGCGGGGCCTTCTGGTATCGATCTGACTCCCCTCATCAGCAACGCCGTCTCCAACGTCATCTCCTCCATGAGTCTGGGCCAGCGTTTCCATCACCAAGACCAGGAGTTCCGCACCATGCTGGATCTCATGTCTCACGGCCTGGAGATTAGCGTCAACACGTCCATTCTGCTGGTCAACGTCTTTCCCTGGCTCTACTACCTGCCCTGCGGCGTTTTCAAAGAGCTGCGGCGCGCAGAGATCGACATCACAGCCTTCCTCAAGAAGATCATCGCCAGGCACAGGGCCACGCTGGATCCGGAGAATCCCAGGGATTTCATAGACATGTATCTGGTGGAGATGCTGGCCCAGCAGAAGAGCTCAGAAGAGAGCCTGTTCTCAGAAGACGAT

Function

symbol description
cyp2u1 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 56. Orthologous to human CYP2U1 (cytochrome P450 family 2 subfamily U member 1).

NR:

description
PREDICTED: cytochrome P450 2U1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8879 True 1058 TUCP 0.55 2 25132003 25134159

Neighbor

gene id symbol gene type direction distance location
esf1 esf1,LOC107757029,LOC107747407,LOC107684260,LOC107675607 coding downstream 147973 24977040 ~ 24984030 (-)
jag1a jag1a,LOC107675628,LOC107594417,LOC107747432 coding downstream 180738 24923196 ~ 24951265 (-)
psen2 psen2,LOC107675694,LOC107684264,LOC107757025 coding downstream 229776 24895841 ~ 24902227 (-)
spast LOC107749266,LOC107675648,LOC107757022 coding downstream 240536 24883400 ~ 24891467 (-)
gprin3b LOC107729386,LOC107594421,LOC107675731,LOC107583186,LOC107757021,LOC107684268 coding downstream 319833 24806784 ~ 24812170 (-)
LOC122329700 sgms2,LOC107729360,LOC107675923,LOC107594470,LOC107684311,LOC107757011 coding upstream 737 25134896 ~ 25138647 (-)
LOC122329893 kif16b,LOC107594414,LOC107747412 coding upstream 74618 25208777 ~ 25225402 (-)
spred2a spred2a,LOC107747416,LOC107675542,LOC107757033,LOC107583232 coding upstream 319045 25453204 ~ 25466466 (-)
ppp3r1b PPP3R1,ppp3r1,ppp3r1a,LOC108441257,LOC107727894,LOC107699153,LOC106024317 coding upstream 375415 25509574 ~ 25522370 (-)
cnrip1a cnrip1a,LOC107676313,LOC107684253,LOC107594460,LOC107583248,LOC108258529 coding upstream 389208 25523367 ~ 25526442 (-)
G6091 NA non-coding downstream 50148 25079996 ~ 25081855 (-)
G6082 NA non-coding downstream 122430 25007908 ~ 25009573 (-)
G6081 NA non-coding downstream 133216 24997652 ~ 24998787 (-)
G6061 NA non-coding downstream 218535 24911141 ~ 24913468 (-)
G6058 NA non-coding downstream 258462 24872629 ~ 24873541 (-)
G6104 NA non-coding upstream 119238 25253397 ~ 25258307 (-)
G6118 NA non-coding upstream 149216 25283375 ~ 25427936 (-)
G6125 NA non-coding upstream 180357 25314516 ~ 25316688 (-)
G6132 NA non-coding upstream 252018 25386177 ~ 25386576 (-)
G6165 NA non-coding upstream 369781 25503940 ~ 25504854 (-)
G6085 hadh,LOC107594428,LOC107729339 other downstream 4179 25126051 ~ 25127824 (-)
LOC122349000 gstcd,LOC107757010,LOC107676029,LOC107729368,LOC107594450,LOC106610363,LOC107684312 other downstream 68121 25024722 ~ 25063882 (-)
G6078 kif16b,LOC107747412,LOC107583193 other downstream 136183 24994483 ~ 24995820 (-)
G6074 LOC107583193,LOC107757030,LOC107747412 other downstream 138658 24988776 ~ 24993345 (-)
G6073 NA other downstream 158632 24972491 ~ 24973371 (-)
G6124 actr2,LOC108423375 other upstream 170438 25304597 ~ 25307971 (-)
G6134 ndufaf5,LOC107594462,LOC107594415,LOC107583196,LOC107684300 other upstream 264332 25398491 ~ 25400017 (-)
G6135 ndufaf5,LOC107675590,LOC107594415 other upstream 266225 25400384 ~ 25402355 (-)
prokr1a prokr1a,LOC107594458,LOC107676304,LOC107747445,LOC107757000,LOC108441199 other upstream 413566 25547725 ~ 25556982 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 579943 25714102 ~ 25715704 (-)

Expression


Co-expression Network