XLOC_006578 (BX649385.1)


Basic Information

Item Value
gene id XLOC_006578
gene name BX649385.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 22191361 ~ 22195168 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012711
AGAAGAGAGAGCCTACATGTGGTGTCTATATCTtagtagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagaCGGATAGCAGTGACAGCACGCCATTGCTCTAAGCTGCATAATTCATGAGGAGACAGAGAGGAGGGCTTGTTATCTCATGCTAGAAGAGCAGGGGTGAGCTGCTCTGTGAATGCGGCAGACACATCCCTGACCCCGACACTGCACAGTCATCCTCCAACAACATTAACAGGCAGATAGACACAACAAACTTTCTGTGACATCAGGACATGGTGACGGCGATGATGATGGTGGcatatttttatcaatatttattaGcaattcatgtgacttcattctccatatgagagtcgtctttaagctgccaatAATTATCTTTGAACTTTGTCTGTTTTCCTAGTGCCCATGTCCTAAAGGTCCCTCTCTCTTCTCTCCAAAAAGCACGCTGTCTTTCTCCATCTAGCTCCTGCTGAGTTGTTCTAACATCCTTGTTCCAGAATTTTCCTTTTAATTTCCTTTCTATATCCTTGTTCGGTTCTTCCAGCTCTGTCCCAGTAATGGATTCAAAGAGGCAGAAAGAGTCCCCATCACACACACCCCCATCTCTGCAGCCTCTGTGACATCACAGATGTTTCCATAGCAACCGGCCTGCCTCCAGTACTCTTCTGTCTGCATCTACTTTTAAAGAGGTAAACCAGTATGGAGAGTGAGTGCTGGTCCTTTTGGAGGATTTAGAAGAGTGGGGTTAAACCCATTTTTGTCCACCATATGCCACTCATCTATGTATCGCATCAGTCATCATCGTGTcgttattgtttaaaaaaactaacaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105395

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012711 True 845 lncRNA 0.44 3 22191361 22195168

Neighbor

gene id symbol gene type direction distance location
XLOC_006577 NA coding downstream 251396 21925701 ~ 21939965 (-)
XLOC_006576 si:dkey-191g9.5 coding downstream 452219 21712284 ~ 21739142 (-)
XLOC_006575 si:dkey-191g9.7 coding downstream 490038 21689267 ~ 21701323 (-)
XLOC_006574 sprn coding downstream 503185 21682770 ~ 21688176 (-)
XLOC_006573 elovl6l coding downstream 519230 21666521 ~ 21672131 (-)
XLOC_006579 mmrn2a coding upstream 424516 22619684 ~ 22646134 (-)
XLOC_006580 glud1a coding upstream 483916 22679084 ~ 22699024 (-)
XLOC_006581 psda coding upstream 544870 22740038 ~ 22774491 (-)
XLOC_006582 CR550304.1 coding upstream 582892 22778060 ~ 22784433 (-)
XLOC_006583 si:ch211-1n9.6 coding upstream 624317 22819485 ~ 22819667 (-)
XLOC_006471 BX537274.2 misc downstream 11926456 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 21365136 825904 ~ 826225 (-)
XLOC_006570 NA non-coding downstream 1043979 21146114 ~ 21147382 (-)
XLOC_006569 NA non-coding downstream 1111950 21076652 ~ 21079411 (-)
XLOC_006568 NA non-coding downstream 1459473 20729834 ~ 20731888 (-)
XLOC_006567 CU633804.1 non-coding downstream 1643863 20546967 ~ 20547498 (-)
XLOC_006585 BX530068.1 non-coding upstream 648662 22843830 ~ 22847484 (-)
XLOC_006595 NA non-coding upstream 1017591 23212759 ~ 23217818 (-)
XLOC_006597 NA non-coding upstream 1212861 23408029 ~ 23411631 (-)
XLOC_006602 AL772289.1 non-coding upstream 1766124 23961292 ~ 23961406 (-)

Expression


Co-expression Network