G6670


Basic Information

Item Value
gene id G6670
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26092009 ~ 26096257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU9739
tttaatagAGAAGTAAAACCATCCGACTTCACACGTTTGATGAAATATTGCACCGGTGCTTTTTATACATTACagaagtctgcatttattttagcaaagctacagtaaaaacagtaaaatattattacagtacaaaaaaaagtttcctactttaatatattgtaaaatgtaatttattgctgtgatacgacgctgaattttcagcatcattgctgaagtgctgctcaagaaacatttatgattattatcagcATTTATAACAGTCACGCTGATTCATGTTTTCATTGAAaccatgacttttttttttctctcctggATTCTTTCATGAAAAGTTATAATAAGACAGAGCCCAAGCATTTTGGTGTTTCCTTGTCAAATACTTACAactctaaataaattaaacataaataataataaaaataagcacataAATAATGGGCAAAGTGGCGGCTGAAAAACCTCCAATGAAATTTATTGCCCCTCGCAATCTTGGACATGCAATGATTTATAATGGTGTAGCACGTAACTATTATAACAGCATTAGAACTATTATAAACAAAccacacagagagaaaagggCATCTTCATCTTTCAATGTTCAAACAGATGAAGCGCTCGAGCATGTTTAACTGGCCACAAACAGGAAACAAGAATGCATTTCCTCTGACTTGTAAAACATGGAAGTGGTAAAATACTGGGAAATTGTGCAACGGGTGAAGCCAGGCGGTTGAGGAGAGCTTCGGCCGGCTTTTAACATCAGATCTGGTGTTTAGGAGAGCGGCgagtaaacatttattacaacTGTAAGTTTGTTGCACTGGAAAACGTACTGCAGAAACCACATTCACAAAGACATCTGGTGCAAATTCAGGGAGGTTGTCATTCAAATGCTATTGAGATCATGTGCCTGTACAATATAGGGTCTAGTCGTCTCATATACAGCATGTGCTTGATACATCGgagcgtgcacacacacacacacagacacacacacagacacacacacagacacacacagacacacacagacacacacacacacacagacacacacagacagacacacacacacacacacagacacacagacagacagacacacagaccaAAATGAAGATCTCAATGCTTTTTGATGAATCCATCCAAATACTCATGGTTCTGCATGAAGAGGGTGTTTACATCGTCTTAAAGGCACAGCACGGAAATACTGCAAATGAACttccccaaaaataaatatcaaatgcaAGATATGACCAATTCAAAGGATTCACAAAATTATTCCAAGACAGTCCAGACGGATGAAAACACAATGGGCTCAATTCACTTAGAAAATCTTAAGAAAAAACCTTTTGAATATGTTGTAATGCCCAAAACCGTTCAAAGCAACGCCTGCACTCGAGCCTGTGGTAAGGACAATATTGTGTGTGCTTTTTCAGATAAGAACAACATCCGTAAAAAAACATGGTAATCAACcgtttgcaatttttttaataattgcacatttttcaaacacAGTTATTCGAATGTCTTAgaatttatcatttgaattttCATCGTTTTTTCAAGATTTGAGTTTTTCAGCGTTCTCAACTTAATATTTATCCTTGGAAGTTTTCCAACACTTATGCACTTCTTAAAattcttgttcattttttaaGAAACGCACATCcttatgaatcatttttgtaaatcGTTTCAAGAACTGCACGCTTAAACTttctcattttcactttttgattTCCTTTTGTAAGAACTTGGCACTTTTTCTAAtgaacttttttaaatgtattattagcaCGCGGGGCTTTTTCCTCAAGAACTGCACGTCTTTCATTCCGACAAACTCctcagatttagttttttcttaagATTTCGATGAATGCAGCCCAGCGTCATATAGTTACGACGATTAAATAAGAGCCGAATCAAAAGTGCTTTATCAtataatcttgaaaaaaaaacgaaaagaaaagaaaatcacgcTAGACCCAAGTGACAATAAAATCTGCAGACCTCAGGGAAATCTCATGTGCTTTTTGGCTGACAGAtgtgaatgtttgtttgtttgcgttCAACGCCATTTCATTTGGCTTGACTCTCTTCGAAAGAATAATAACGTTTCCTCGATGAGCTGGAACCAGCGTCCTTTACGTTAAACACGAATATCAGGATCACAGACCCCAGCGCTTTCCAGCGCAAACATAACCAACAGCGTGCTGAACATTCCTCGCCCGTCCCGCCGccgcagtgcattctgggtaaGAGCGACTTCAACCGGGCAAGTGCGTTTTGAGACAAGCCTGACTGAAGCGAAACCATTTAAACATCGCAAACGAcaaataacttaattttaatgaatgcatttttaaaaataagaaatattcaAAGTTGAAAGACACGCCGTAAGCCTGTATTCAGCTCTGACGAGCTACGTGTGATCACTATTTCTACACGCCGGAGTTAAATTACGATCATAATTAGAATAATACAACTGAAATATCTAAAAAGGGGTGTGGTTTATCTTCATATGCGTCCTTCCTTTGTTTTTGgcttttatcttttttagaaaaataaacccTTTGTTATCAAAACCTTGCCGTTGTGCACGATTAAAAGCAGACGGTCATATCGAACAGGCCTGCTAGCCGCACGCTAACCTTCATCCTTCACTAGCGTCCTGTAAAAGGTGCACGTGCGATCTCAGAGATAAAAGCACAATCTTTGTCGTTTATTTGGTCGTCGTCCATCGTTGGGACTGCAATTTCTGTTCGGTGTTGCAATAAACACCCACTTTAGCTTTAGCTTCATGTCTGGGAACACAATGGAGAAATCCTAGATGCTAGAAAACGGTTAACCcttctttacatttaaatccgAACCAACAACTCCTCTCAAAAAGCAGAAGCAGCCTCTGGAGAGCGTTAGGAACATTAGAAACAAGGCCACATGCACACTGCGGGGTTTAGGAAGAGAATCAGGCGTATGAATCATGGGGTTTAGATTCAGAACTGAACTCTAAAGAGCAGACGaatgtttataaatacagcatGTGAAAAACAGAGTGCCATCCATAGtcttatatgaataaaaatgctcattgattaaatatagaaatacctTAAAGGTCAAATATGTGCCGAcagatatatatacaaaaaataggTCATTTAATAGAAAGTGATTGCGAGGATGGTATTGTGCTATTCTcataaaattcatataaaataattacttcaTGTTGTGCTTTCAGATTTGTGTATTTTGACAATGCAGGCgcagtaataaaatgtaattatacaatacaaatgtatgtaaaaataccacatgtgttgcttttatttgactactgaatattaattacattagtttaaatgattaataggattctaaatgaattattttaataatcaaaaaagaaaagaaaaatcaggaccccttaaaaaaaatgagatcTCAAGGGGCTATCCCTTTAATAAATTCAGTTGATTATTATGTAAACGTTCAGCGTTCAGTTTTCAACTAAATCCAAACTGGGTTTGAGGCGttgtgtaaataattaatttcgGTGCATCAATAATAGTTTGCATTTTTTCGGCATTCCACATTGTGCTTGACTTCCAAGCTATACATGACACGCGCGCAGCTTTGAACACGGCGTGGACATTTAGGATTTGAATGCAGCGGTCAGTGTATTTAGCAGTGTGCATGTGGCCTGGAGCCTTAGCCCTGCGAAGCACTCATCAGGTGCACCGTCTCGTTTGAGGAGATGCGTGTGACAAGCCCCGGTGATTCCTCACAAGGAGCATCGGACACCGGTTAGAGCGCACGCTTTAGACACTCGAAGCAAATGTAGCGCACATTCAGTAATGCGTGACACATATTCATATATCCCGGTGTATACTGGCAGTGATCCCATAGGGGAGTTGAAACAGCCAAAATTTTCCCCAAAAAAACCCATCCGTGTGGCTTTTCCGGTCCGGTAACACAAGCTTGAGACAGAAGACGTTGAGTGCAACACAGCCAGCGAGAAGGAGGTGGCATTGATGcgttcttttaaaaatcaccTCAAGACTTGGCGTCGTCCTGTTCTGGGTCGGACTGCGGGTCGGCGCCGGACAGGACGAGCTCCACGGGCATGATGAGCGAGGTGTCCGAGTCGGTGCTCATGGACGGCTGGTGCTCACCTGAAACAGAGCAAAACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9739 True 4203 lncRNA 0.39 2 26092009 26096257

Neighbor

gene id symbol gene type direction distance location
znf330 znf330,LOC107746098 coding downstream 8825 26077265 ~ 26083184 (-)
il15 LOC107730128 coding downstream 15147 26069176 ~ 26076862 (-)
aptx aptx,LOC107757069,LOC107746089 coding downstream 278160 25809879 ~ 25813849 (-)
LOC122353214 vps54,LOC107700845,LOC107598476,LOC107709616 coding downstream 364471 25716158 ~ 25727538 (-)
LOC122353232 rnf150a,LOC107694428,LOC107653218,LOC107564413,LOC107725723,LOC107729769,LOC107700883 coding downstream 378035 25706824 ~ 25713974 (-)
elmod2 elmod2 coding upstream 39449 26135706 ~ 26141269 (-)
zgc:66455 NA coding upstream 45527 26141784 ~ 26147822 (-)
b3gnt2a LOC107703838,LOC107746084,LOC107729991,LOC107576349,LOC107598544 coding upstream 51675 26147932 ~ 26155748 (-)
commd1 commd1,LOC107703732,LOC107598557,LOC107594359,LOC107700824 coding upstream 60673 26156930 ~ 26163732 (-)
usp34 usp34,LOC107729952,LOC107746122 coding upstream 94662 26190919 ~ 26235100 (-)
G6687 NA non-coding downstream 25823 26064559 ~ 26066186 (-)
G6652 NA non-coding downstream 153158 25938421 ~ 25938851 (-)
G6650 NA non-coding downstream 173224 25918570 ~ 25918785 (-)
G6636 NA non-coding downstream 245479 25838851 ~ 25846530 (-)
G6634 NA non-coding downstream 247015 25835938 ~ 25844994 (-)
G6596 NA non-coding upstream 92801 26189058 ~ 26190510 (-)
G6741 NA non-coding upstream 267415 26363672 ~ 26367603 (-)
G6747 LOC103457336,LOC103359577 non-coding upstream 272693 26368950 ~ 26369519 (-)
G6749 LOC107729639,LOC107598502,LOC107700871,LOC107736507,LOC107703825,LOC107594284 non-coding upstream 277405 26373662 ~ 26374623 (-)
G6769 NA non-coding upstream 348640 26444897 ~ 26446738 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 228222 25831324 ~ 25863787 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 376305 25714102 ~ 25715704 (-)
prokr1a prokr1a,LOC107594458,LOC107676304,LOC107747445,LOC107757000,LOC108441199 other downstream 535027 25547725 ~ 25556982 (-)
G6135 ndufaf5,LOC107675590,LOC107594415 other downstream 689654 25400384 ~ 25402355 (-)
G6134 ndufaf5,LOC107594462,LOC107594415,LOC107583196,LOC107684300 other downstream 691992 25398491 ~ 25400017 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other upstream 34531 26130788 ~ 26135486 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other upstream 320602 26416859 ~ 26417897 (-)
LOC122353745 slc9a3r2,LOC107729606 other upstream 357993 26454250 ~ 26523402 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 705653 26801910 ~ 26802954 (-)
si:ch211-286b5.5 NA other upstream 821412 26917669 ~ 26920034 (-)

Expression


Co-expression Network