G6749 (LOC107729639,LOC107598502,LOC107700871,LOC107736507,LOC107703825,LOC107594284)


Basic Information

Item Value
gene id G6749
gene name LOC107729639,LOC107598502,LOC107700871,LOC107736507,LOC107703825,LOC107594284
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26373662 ~ 26374623 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU9850
aaaaatatagatttttataatgatttaaattttcTTCTGGACTTTCATTGCCTGTATCAGTTAGGATACGGGAAGCTGCAGTTACTTTCAAAGCTCACCTCTCCAGCGGACATAGACGCTCTCATATTTGGTGTCCTTCTGTCCCTGGTCTCGATGTGCCTTTCAGCCCAGTCGTAACGGATAAAAGACCGTCTGTTCTCACGGTTGGACGCCCGCTCCTTGGTGTTGCCCGGCGGTTGGCTCTTGGCCCTGGACGGTTTTCTTGATACGGATAGCTGAGATTCATCGCTGTCCAGCTGCTTATTAGGGTAGCACGGCTCCGAACGCGGCGCCCTGCGTCTCTGTCTCCGCTTCGGGTTAGACTCCGATGTGCACTGGTATCCGTGTGAACCTCTCCATTCACCCGAGGCTTCCAGGAGTCCTCTGCGTTGTCGTTCTTGGACTCCGATGAGGATGTGTAGTGTTTGGCATTTGAGACGTTCCCTTCCTTCTGTTTGGGACTGGACCGTCCGCTCGAGTCGGACCCGCTGTCCCATCCGTCTCCGAATAGCGGCCTGTGCGTCTGCTCCATCAGCCTCCGCGTCAGTCTGTACTTCACAGAGTCCTCGTAGCATTTCGAGAACGTCTCCCACTTGGGATCCCTGAACTTCTTCATGTACTCCGTCCGGATCTTCTTGGACATCAAGTTGTTATTGGCAGACATCGTGAAATGATCACCTACGGAGTGAACACAATGTCAGCCTTGCCTGTGCACGCTCGCATACTTCCCGTACTCCATCTGTACACACACAGCGATGATTTTAGTATTGCATTGAGCC

Function

NR:

description
PREDICTED: centriole, cilia and spindle-associated protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9850 True 818 lncRNA 0.52 2 26373662 26374623

Neighbor

gene id symbol gene type direction distance location
taf5l taf5l,LOC107703828,LOC107700873,LOC107580738 coding downstream 19464 26348591 ~ 26354198 (-)
capn9 capn9,LOC107729683,LOC107598506,LOC107700872,LOC107746105,LOC107594336,LOC107703830 coding downstream 25166 26340724 ~ 26348496 (-)
ltv1 ltv1,LOC107746106,LOC107700874,LOC107729687 coding downstream 33405 26334613 ~ 26340257 (-)
LOC122353257 NA coding downstream 57973 26313205 ~ 26315689 (-)
akt3b akt3b,LOC107594289,LOC107703832,LOC107729704,LOC101071975,LOC108259077,LOC108438606,LOC101174244 coding downstream 89919 26271910 ~ 26283743 (-)
si:ch211-133l11.10 si:ch211-133l11.10,LOC107594285,LOC107746109,LOC107703823 coding upstream 5494 26380117 ~ 26383692 (-)
rfx1b LOC107703707,LOC107746111,LOC107594279,LOC107729889 coding upstream 52048 26426671 ~ 26440524 (-)
nthl1 nthl1 coding upstream 102029 26476652 ~ 26481563 (-)
pkd1a pkd1,LOC107729871,LOC107700794,LOC107598528 coding upstream 152267 26526890 ~ 26606252 (-)
wu:fj19g03 NA coding upstream 264561 26639184 ~ 26643244 (-)
G6747 LOC103457336,LOC103359577 non-coding downstream 4143 26368950 ~ 26369519 (-)
G6741 NA non-coding downstream 6059 26363672 ~ 26367603 (-)
G6596 NA non-coding downstream 183152 26189058 ~ 26190510 (-)
G6670 NA non-coding downstream 277405 26092009 ~ 26096257 (-)
G6687 NA non-coding downstream 307476 26064559 ~ 26066186 (-)
G6769 NA non-coding upstream 70274 26444897 ~ 26446738 (-)
G6799 NA non-coding upstream 137769 26512392 ~ 26512958 (-)
G6801 NA non-coding upstream 138946 26513569 ~ 26513920 (-)
G6827 gprc5b,gprc5bb,LOC107729503,LOC107578286,LOC107700862,LOC107598492,LOC107709629,LOC107703814 non-coding upstream 278619 26653242 ~ 26706828 (-)
G6834 NA non-coding upstream 314731 26689354 ~ 26690490 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 238176 26130788 ~ 26135486 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 509875 25831324 ~ 25863787 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 657958 25714102 ~ 25715704 (-)
prokr1a prokr1a,LOC107594458,LOC107676304,LOC107747445,LOC107757000,LOC108441199 other downstream 816680 25547725 ~ 25556982 (-)
G6135 ndufaf5,LOC107675590,LOC107594415 other downstream 971307 25400384 ~ 25402355 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other upstream 42236 26416859 ~ 26417897 (-)
LOC122353745 slc9a3r2,LOC107729606 other upstream 79627 26454250 ~ 26523402 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 427287 26801910 ~ 26802954 (-)
si:ch211-286b5.5 NA other upstream 543046 26917669 ~ 26920034 (-)
LOC122349164 NA other upstream 609921 26984544 ~ 26992582 (-)

Expression


Co-expression Network