G653 (creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464)


Basic Information

Item Value
gene id G653
gene name creg1,LOC107751059,LOC107739160,LOC107654633,LOC107551109,LOC107694464
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 2561355 ~ 2561966 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU997
AATGTTCGGTAGGGTGTTGTCTTCTGAGTGGATTACTGGTCTTCACCTGCAGGTCCTGCACCGAGATCTCCAGGTGAGTCAGATACAGGTACGGGGTTCCGGTTCCGTTGCCGGCGGGCCCGTCGCTGATGGAGAAGGCGTTGGAGAAGGGCTGTCCTAGGACCGGGTCGTGAGTGGAGATCGTGGCCATCGAAGCCCAGTCGCACTTATTGACCACGAACCGGGCCATCCGGGCCACCTCCTCGTGCGGCGGAACCGACAGAGAGCCACCGACAGCGGCGACGAGCGCGACACACACCGCGAGCAGCGAGCGACTCTtcatcagcatcatcatcatcttcagcGCTGACCCAAACCTTCCTAAAACCTCTGTGACGTCAGGAATGATTTAGTGGAGACAGGGAGGATATGAACTTTAATGATTCACGTGATCAGTCACCGATCACTGTGAACAGAAATGATTCGTAAGATCGATTCAGGAGCGAATTTCATAACAAATAGTCACG

Function

symbol description
creg1 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood. Orthologous to human CREG1 (cellular repressor of E1A stimulated genes 1).

NR:

description
PREDICTED: protein CREG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU997 True 506 lncRNA 0.34 2 2561355 2561966

Neighbor

gene id symbol gene type direction distance location
LOC122351178 LOC107739159,LOC107694465,LOC107570071,LOC107751098,LOC108429813,LOC108258592 coding downstream 1016 2559530 ~ 2560339 (-)
f7l LOC107751062,LOC107694469,LOC107570084,LOC107551096,LOC107747071 coding downstream 16369 2540488 ~ 2544986 (-)
f7 f7,LOC107747062,LOC107654615,LOC107551097,LOC107570083 coding downstream 20940 2536351 ~ 2540415 (-)
f7i f7,LOC107747061,LOC107654598 coding downstream 26702 2530896 ~ 2534653 (-)
f10 LOC107654567,LOC107751061,LOC107694470,LOC107570070 coding downstream 31867 2524609 ~ 2529488 (-)
pou2f1a pou2f1,LOC107751057,LOC107662118,LOC107654677 coding upstream 12776 2574742 ~ 2588258 (-)
dusp27 dusp27 coding upstream 27681 2589647 ~ 2597889 (-)
LOC122353060 LOC107570085,LOC107751087,LOC107711130,LOC107576869 coding upstream 42438 2604404 ~ 2628263 (-)
LOC122345881 prss23,LOC107570079 coding upstream 138524 2700490 ~ 2704267 (-)
LOC122342272 LOC107751049 coding upstream 148751 2710717 ~ 2717844 (-)
G638 NA non-coding downstream 2491 2556243 ~ 2558864 (-)
LOC122351916 NA non-coding downstream 9094 2548924 ~ 2552261 (-)
G647 NA non-coding downstream 45180 2515654 ~ 2516175 (-)
G640 NA non-coding downstream 50666 2474322 ~ 2510689 (-)
G617 NA non-coding downstream 181414 2378431 ~ 2379941 (-)
G652 creg1,LOC107694464,LOC107751059,LOC107551109,LOC107739160,LOC107654633 non-coding upstream 225 2562191 ~ 2564410 (-)
G666 NA non-coding upstream 90751 2652717 ~ 2654832 (-)
G681 NA non-coding upstream 178261 2740227 ~ 2742428 (-)
LOC122351434 NA non-coding upstream 259222 2821188 ~ 2833731 (-)
G692 NA non-coding upstream 504845 3066811 ~ 3070069 (-)
LOC122343438 son,LOC107698912,LOC107555269,LOC107698212,LOC107571887,LOC107709257,LOC565999,LOC107751080 other downstream 956371 1592069 ~ 1604984 (-)
mbnl2 mbnl2,LOC107677847,LOC107653675,LOC107559795,LOC107555253 other downstream 1329708 1076188 ~ 1231647 (-)
LOC122342053 trim25l,LOC107582366,LOC107746627,LOC107557130,LOC107686775,LOC108430858,LOC107723752 other downstream 1812991 738137 ~ 748364 (-)
G67 NA other downstream 2125230 435808 ~ 436125 (-)
G20 NA other downstream 2374270 186420 ~ 187085 (-)
G654 LOC107751054,LOC107570078,LOC107662112 other upstream 126799 2688765 ~ 2689464 (-)
gpc5a LOC107677851,LOC107658649,LOC107730387,LOC107553999,LOC107560792,LOC107739379 other upstream 574542 3136508 ~ 3284786 (-)
G782 slitrk1,LOC107756981,LOC107570247,LOC107744763,LOC107556534 other upstream 1445874 4007840 ~ 4014287 (-)
G820 NA other upstream 1736344 4298310 ~ 4299193 (-)
mdh1b mdh1b other upstream 2394153 4956119 ~ 4960210 (-)

Expression


Co-expression Network