LOC122322914 (LOC107722580)


Basic Information

Item Value
gene id LOC122322914
gene name LOC107722580
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29085844 ~ 29088593 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216551.1
GCGCCAGATCATCAACCAAATTGTGATCATCCAGAGAGATTTGGTACAAGGTGTCAGGTTATATGTATAAGTGTTTTcctggacgctgttactgggagaggATGGCGTTGGGACAGAAATTTCAGTGACATAAAGGAGGAGGAAAGGAGGAAGTTACTGTCGATTTGGATACAACACCAAATCATAGAGTGTGTTTTGCACTGCTAATGGATTCACTGTCTGGCACAATGATAACAAAACTGCTATATCTGTCCCTTCACACTGCTCTAATAGAGTAGGAGTGTATCTGGACTGGTCTGTCATTCTACAGTCCACTCACACACTTAATCAACACCACATTCACTAAATCTCCCTACGCTGGACTTAGGGTTTATGATTCCTCAGTATCTCTGTGTGAGATATGTTCAACTCGGTAATAACGCAAAATATGGACATGAAGAACCatcaaagttgaaaaaaaatattttttcattaatcaacTGAAAACCATGACACTGATTACATTTAGCAGAACTACAGTCTTAAATGCAAGGAGGCATCATGTGATGTTTCAGGAGGCCTGCTCTGTGGGAGTTAGAGAATCCCAACAtattgagaaaacaaaaactttcacaAAGTCACAGATAACATACGTGAACTTATACTCATGACTCAGAAAATACTGATGATAGTAAATGTAGCatactgagaaaacaaaaacgttCACAACCTTAGCCTTGAGTCTGTGTGGATTCTGCATGTTTCTGTTGATTGTGAACATGTAATCGctgttaaacatttctttaaagacAGAGGAGGAGCCTGCAGTCTTACCGATATAAAGAGTCCTTGCATCAGACTAAACAGAATAAACAGTGACTTACAATCTGGGGAGAGATTTAGAAGATGACAATGATATTATTTTTGGTGGCACTTTTCCCGGTTGTACTGGGCAGTGACTGTAAGTTCATGCAGTTTGACTGCTCTGACGTCTACAACTCAGGACAGACGGCCAGCGGGATCTACTCCATCTATCCTGCAGGAGATGTTCCTGTCTGGGTTCACTGTGACATGATCTCAGATGGGAAAGATGAAGATAAAGGAGGATGGACGGTGATTCAGAGGAGAATGGATGGCAGCGTGAATTTCTATCGGCCGTGGGATCAGTACAAGAGAGGATTTGGGAATATAGAGAGTGAATACTGGCTGGggcTGGAGAACATGTATCAGCTGACACGAAACGGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCAGTACTCGTCTTTCTCTGTGGATTGTGAATGTTCTGGATATAAACTACAAGTTTCAGGGTTCACTGATGGAGGAGCAGGCAACTCTTTGATTGTCCACAACAATCAGAAATTCACAACGTTTGACAAGGATCAAGACGGCCATGCTGATAACTGTGCTAGAATGCGTCTCGGGGGGTTTTGGTACGCAAGCTGTCTGGAGGCAAACCCCAACGGTGTGTACTTATGGGGAAACGATAACACTAATTCCGCCATTGGTGTTGTCTGGTCGACCTGGAAAAACAATTTCACTTACAGTATGAAGTCTATTAGCATGAAAATCAGACGTGTATCTTAGAGACTTTAATGATTCCAGGAGCTATTGGTCTtataatatatgctttatatcaTACCTGTGCTAAAGAGTAAATTATGTAGGTCAGGGTGACTTTAATAAACTCCAGCACTGAaagca

Function

NR:

description
PREDICTED: microfibril-associated glycoprotein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216551.1 True 1731 mRNA 0.42 5 29085844 29088593

Neighbor

gene id symbol gene type direction distance location
LOC122356586 LOC107721946,LOC107662706,LOC107560594 coding downstream 386 29076419 ~ 29085458 (-)
LOC122362918 LOC107662727,LOC107722580 coding downstream 11148 29072735 ~ 29074696 (-)
LOC122358964 LOC107560570,LOC107742521,LOC107571120,LOC107746494,LOC107668675 coding downstream 20297 29062167 ~ 29065547 (-)
dnm2b dnm2,dnm2b,LOC107742527,LOC107571132,LOC108258735,LOC100701110 coding downstream 24170 29050774 ~ 29061674 (-)
LOC122323133 LOC107571137,LOC107668677,LOC107662732,LOC107560590,LOC107719145,LOC107742532,LOC107560573 coding downstream 42553 29037722 ~ 29043291 (-)
LOC122324118 NA coding upstream 553 29089146 ~ 29090774 (-)
ubl5 ubl5 coding upstream 38327 29126920 ~ 29128828 (-)
LOC122363056 NA coding upstream 50849 29139442 ~ 29141023 (-)
wu:fk65c09 LOC107685033,LOC107723084,LOC107573413 coding upstream 76509 29165102 ~ 29169899 (-)
LOC122355388 LOC107723083,LOC107685037 coding upstream 82049 29170642 ~ 29182688 (-)
G7591 NA non-coding downstream 68688 29015665 ~ 29017156 (-)
G7579 NA non-coding downstream 104726 28971894 ~ 28981118 (-)
G7551 NA non-coding downstream 284179 28792644 ~ 28801665 (-)
G7550 si:dkey-222h21.2,si:ch211-114l13.4,si:ch211-236p5.3,LOC107729025,LOC107575333,LOC107574376,LOC107575359,LOC107659785,LOC107576777,LOC107575507 non-coding downstream 284988 28790466 ~ 28800856 (-)
G7547 NA non-coding downstream 311678 28773354 ~ 28774166 (-)
G7575 NA non-coding upstream 26903 29115496 ~ 29124052 (-)
G7574 NA non-coding upstream 68251 29156844 ~ 29158718 (-)
G7620 NA non-coding upstream 202168 29290761 ~ 29291343 (-)
G7624 NA non-coding upstream 204033 29292626 ~ 29293410 (-)
G7629 NA non-coding upstream 228988 29317581 ~ 29318226 (-)
LOC122324333 NA other downstream 141226 28942988 ~ 28944618 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other downstream 560293 28523705 ~ 28525551 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other downstream 639253 28406182 ~ 28446591 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other downstream 693791 28391039 ~ 28392053 (-)
G7475 NA other downstream 837321 28244128 ~ 28248523 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other upstream 13093 29101686 ~ 29112734 (-)
G7569 gtf3c1,LOC107678316 other upstream 213214 29301807 ~ 29310598 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other upstream 322514 29411107 ~ 29434213 (-)
G7648 LOC107662685,LOC107678949 other upstream 337505 29426098 ~ 29476338 (-)
G7655 LOC107662685 other upstream 364166 29452759 ~ 29475388 (-)

Expression


Co-expression Network