nansa (nansa,LOC107723182,LOC107758866,LOC107692601,LOC107665955,LOC107557947)


Basic Information

Item Value
gene id nansa
gene name nansa,LOC107723182,LOC107758866,LOC107692601,LOC107665955,LOC107557947
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7792648 ~ 7796560 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216834.1
AAGTTCCACTGATTCTCTCAACCCTGCGTTTGACGCGTGTAAAGCAGTGAGATAGACTCACTTCTGAAGCTTTTCTTCTTGTGCTTGTGAATTTGGGTGTAAAATGCCTCTTAAATTTGAGTTATGCCCCGGCCGCACGATCGGAGGAAACAACCCGTGTTTCATTATTGCAGAAATCGGACAGAATCATCAGGGAGATATTGAAATCGCCAAGAAAATGATCAAGATGGCAAAGGACTGCGGCGCGGACTGCGCGAAGTTTCAGAAGAGTGAGCTGGAGTTTAAGTTCAATAAGAAAGCTCTGGAGAGGCCGTACACCTCCAAACACTCCTGGGGAAAAACATACGGAGAGCACAAGCGCCATCTAGAGTTCAGTCATGAGCAGTACAGAGAGCTGCAGCGGTACGCCAAAGAAGTGGGCATCTTCTTCACTGCGTCGGGGATGGACGAGATGGCTGTAGAATTCCTCCATGAGCTCGATGTGCCTTTTTTCAAAGTTGGATCTGGAGACACCAACAACTTCCCCTACCTCAAAAAAACTGCCCAGAAAGgacGTCCCATGGTAGTGTCCAGCGGAATGCAGTCCATGGAGACCATGCGCCGTGTTTATGCAACTGTGAAGGAACACAACCAGAACTTCTGCATCCTGCAGTGCACAAGTGCATATCCACTGGAGCCCGAGGATGTCAACCTGCGGATTATCACGGAATATCAAAAGGAATTTCCAGACATTCCCATTGGTTACTCAGGCCATGAAAGCGGGGTCAGCGTCACAGTTGGGGCAGTTGCACTGGGAGCAAAGGTCGTGGAGCGTCACGTGACCTTGGACAAAACCTGGAAAGGCAGCGACCATGCGGCATCTCTGGAGCCTGAAGAGCTGGCTGAGCTGGTGCGATCGATCCGCATTGTGGAGAGAGCTTTAGGCACTGGAGTGAAACGCATGCTGCCCTGCGAGGTGCCATGCCATGATAAGCTTGGGAAATCTGTAGTGGCTAAGACGGACATCCCGAAAGGTACAGAACTGACCCTTGACATGTTGACGGTGAAAGTGGCAGAACCTAAGGGTGTAGCCCCAGAAGACATCTTCCAGCTGGTTGGGAAGAAAGTGACAACAGACATCAAAGAGGATGAGAGTGTCACTGAGGATGTAGTCGACAACTACGGCAAAAAAGCCAAAGCTTGAGGAAAACCGACTCCCCGGCCTGGCATTCTTCATCAGACTGGAAAGAAATTGAGATATTTTGCCAAAATGCATAATTCAAGAACAATGGTGAAAACggcattatgttttgtttgatgTAAGACTGAGACAAATGCAACAGTACAACAGTACAACAAATGCTGTTAATTGTTATTTGCCAAATACTGTTGAATAAATAACGGAGCTAAAAAGCA

Function

symbol description
nansa Predicted to enable N-acylneuraminate-9-phosphate synthase activity. Acts upstream of or within embryonic skeletal system development. Predicted to be located in extracellular region. Is expressed in several structures, including alar plate midbrain region; axis; digestive system; hatching gland; and polster. Human ortholog(s) of this gene implicated in spondyloepimetaphyseal dysplasia, Genevieve-type. Orthologous to human NANS (N-acetylneuraminate synthase).

NR:

description
PREDICTED: sialic acid synthase

GO:

id name namespace
GO:0016051 carbohydrate biosynthetic process biological_process
GO:0008781 N-acylneuraminate cytidylyltransferase activity molecular_function
GO:0047444 N-acylneuraminate-9-phosphate synthase activity molecular_function
GO:0050462 N-acetylneuraminate synthase activity molecular_function

KEGG:

id description
K05304 NANS, SAS; sialic acid synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216834.1 True 1395 mRNA 0.48 6 7792648 7796560

Neighbor

gene id symbol gene type direction distance location
gne LOC107665959,LOC107723184,LOC107692604,LOC107758846 coding upstream 606 7774811 ~ 7792042 (+)
tmod1 tmod1,LOC107665961,LOC107692607,LOC102782831 coding upstream 30699 7749596 ~ 7761949 (+)
tdrd7a LOC107723197,LOC107692608,LOC107564078,LOC107557954,LOC107665979,LOC107758895 coding upstream 43199 7738766 ~ 7749449 (+)
stra6l stra6l,LOC107564087,LOC107665941,LOC107692609,LOC107758896,LOC107557952 coding upstream 54030 7731788 ~ 7738618 (+)
LOC122343081 LOC107723175,LOC107692611,LOC107565010,LOC107665966,LOC107758893,LOC107557956 coding upstream 88517 7696411 ~ 7704131 (+)
clta clta,LOC107723183,LOC107564055,LOC107692603,LOC107557948,LOC107758902 coding downstream 596 7797156 ~ 7804962 (+)
c1h4orf33 LOC107557949,LOC107564032,LOC107758903,LOC107692602,LOC107723188,LOC107665957 coding downstream 21863 7818423 ~ 7821348 (+)
noctb LOC107742507,LOC107692596,LOC107702303,LOC107714224 coding downstream 667271 8463831 ~ 8471506 (+)
LOC122344791 zgc:101819,LOC107565358,LOC107692706,LOC107714206,LOC107562979,LOC107702306 coding downstream 704114 8500674 ~ 8505353 (+)
ank2a LOC107564962,LOC107692594 coding downstream 709039 8505599 ~ 8566094 (+)
G1732 NA non-coding upstream 84517 7706885 ~ 7708131 (+)
G1698 NA non-coding upstream 144024 7647889 ~ 7648624 (+)
G1697 NA non-coding upstream 164337 7624948 ~ 7628311 (+)
G1706 NA non-coding upstream 186148 7598267 ~ 7606500 (+)
G1677 NA non-coding upstream 210558 7513555 ~ 7582090 (+)
G1751 NA non-coding downstream 9145 7805705 ~ 7806252 (+)
G1752 NA non-coding downstream 10791 7807351 ~ 7808014 (+)
G1750 LOC107692600 non-coding downstream 11743 7808303 ~ 7809221 (+)
G1753 NA non-coding downstream 14423 7810983 ~ 7811354 (+)
G1754 NA non-coding downstream 15593 7812153 ~ 7813651 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other upstream 71223 7720265 ~ 7721425 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 640428 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 932378 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 947100 6711635 ~ 6845548 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 158151 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 810265 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 826598 8623158 ~ 8634399 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 903880 8700440 ~ 8705873 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other downstream 965579 8762139 ~ 8780164 (+)

Expression


Co-expression Network