LOC122324036 (LOC107571898,LOC107659785,LOC107659779,LOC107576778,LOC107571412,LOC107574527,LOC107675009)


Basic Information

Item Value
gene id LOC122324036
gene name LOC107571898,LOC107659785,LOC107659779,LOC107576778,LOC107571412,LOC107574527,LOC107675009
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29809374 ~ 29811519 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218256.1
CTGCAGAAGCTCAGATAAGCGGAAGACTCTGGCAAACACTGAAGTAGACGTGATGTGGGCGTGTGGTTTCTATGGAGAGTCTGTCAACGTCACGCTCTTCCTGAACATGACCGGAAATCGtATGGATCACAAAGTAGAGATCAGAATACCAGCGGAACTACGAAGGTACGCCTGTGATCTCTCACTGgttccaaacacagcacacactcgtctctctgtgtctgagaACAGCAGGAAAGTAAAACATGTGAAAAAGCCTCagtcgtatcctgatcatcAAGACAGATTTGATGACTGTGAGCAGGTTCTGCGTGGACTGAGTCTGtctggacgctgttactgggaggctGAATGGAGTAAATATAGCAGTGTCATATATAAAGGAATTAGCTGGAAAGGAGAGACTGACCATTTGTTTGGATCTAATGACAAATCCTGGAGTCTCTACTGCTGTGAAAATCAGTTTTCAGCGAGGCACAATAATAACAGCACTGTCTAATAGAGTAGGAGTTTATCTGGACTGGTCGGCCggctctctgtccttctacagcgtctctgacacacacacactcacacacttacacacattcaaCACCACATTCACTGAACCCCTCTACGCTGGGATTGGGGTTTATGATGGTTCTACAATGTCCAATTAAAAGAGAGacatgtaattaaaaattagaGATAAACTTGATATGTTTAGTCACATGTTAGCACTGTGTGTACTGCCACCTTGAGGCCACTGCATTAAATACAACATATACACTCATTCATGAAATCACCACCAGGTAGCACCAAGGGTAAAGTACAGAACTTTCTTAGTAAAGCTGGAAATgtgacattttcacttttaaatgaaGATGATGAAAAGAGCTATGAACAGTACCATAATGGTCACATGTATCATGTGCAGAtgatctctctgtgtgtctgtggatgatctgttcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtaggttgtcaggctgtatggtgacggaggaaggctgtggttatttgtcttcagctctgagttcaaacccctctcacctgagagagctggatctgagctacaatcacccaggagattcaggagtgcaGCTGCTCAAACACAAACTGGAGGATCCCAACTATAAACTGAAGATACTCAACATATATCAACATGCAGCCCAAAGCCATGTAGGGCCCATCCCTCAGGTCCATATAATTGGTACCACCAGGAAATGTTGGCAGGGGAGATCAAATAAGACTACCTGTGATAAGCTGTCCTGACAATTAACTTGAGAGATTGCATcgaattttgtgtgtttgtgtgttaatagTGTAGACCATCAGAATGATAGCATGACCAAAAAGGTATATgatcaaatgcacacacatctTCGTTTGTTGCTGCCATTGTGTATTCATTGcttttctgttcttgtgttcCGATGCTTGTGATCTCACATTGGATCCAATCACAGCACACACTCA

Function

NR:

description
PREDICTED: protein NLRC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218256.1 True 1493 mRNA 0.44 3 29809374 29811519

Neighbor

gene id symbol gene type direction distance location
LOC122363120 LOC107722580 coding downstream 791 29806587 ~ 29808583 (-)
LOC122358417 LOC107721946,LOC107662706,LOC107560594 coding downstream 3154 29799978 ~ 29806220 (-)
LOC122324192 zgc:92827,LOC107758210,LOC107665919,LOC107758399,LOC107573835,LOC107668524,LOC107573875 coding downstream 17137 29786585 ~ 29792237 (-)
ears2 ears2 coding downstream 214547 29589963 ~ 29594827 (-)
wfikkn1 wfikkn1,LOC107678954,LOC107758378 coding downstream 286131 29519894 ~ 29523243 (-)
LOC122357555 sh2d3a,LOC107685029,LOC107662707,LOC107560576 coding upstream 10738 29822257 ~ 29832148 (-)
LOC122349594 si:ch211-15j1.5,LOC107574374,LOC107576777,LOC107725412,LOC100334101 coding upstream 34106 29845625 ~ 29848380 (-)
LOC122351861 primpol,LOC107656685,LOC107702393,LOC107750460 coding upstream 344190 30155709 ~ 30165350 (-)
LOC122350995 LOC107660492,LOC107757584,LOC107700259,LOC107548308 coding upstream 496444 30307963 ~ 30314051 (-)
LOC122350179 rhoh,LOC107548321,LOC107598269,LOC107757583 coding upstream 507562 30319081 ~ 30321983 (-)
G7675 cdc37 non-coding downstream 228247 29524195 ~ 29581127 (-)
G7686 NA non-coding downstream 255788 29522899 ~ 29553586 (-)
G7694 NA non-coding downstream 260172 29547872 ~ 29549202 (-)
G7683 LOC107739936,LOC107690077,LOC107566820 non-coding downstream 308677 29496887 ~ 29500697 (-)
G7654 LOC107662685 non-coding downstream 334523 29470716 ~ 29474851 (-)
G7751 NA non-coding upstream 74761 29886280 ~ 29886672 (-)
G7755 NA non-coding upstream 103149 29914668 ~ 29915054 (-)
G7761 NA non-coding upstream 206764 30018283 ~ 30018557 (-)
G7764 LOC107691293 non-coding upstream 221051 30032570 ~ 30037959 (-)
LOC122351377 NA non-coding upstream 286339 30097858 ~ 30099331 (-)
G7648 LOC107662685,LOC107678949 other downstream 333036 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 333986 29452759 ~ 29475388 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 375161 29411107 ~ 29434213 (-)
G7569 gtf3c1,LOC107678316 other downstream 498776 29301807 ~ 29310598 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 656829 29067982 ~ 29152545 (-)
G7816 NA other upstream 380682 30192201 ~ 30197848 (-)
G7868 NA other upstream 818715 30630234 ~ 30630505 (-)
G8009 NA other upstream 1131979 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 1720550 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 1738667 31550186 ~ 31554035 (-)

Expression


Co-expression Network