sertad2a


Basic Information

Item Value
gene id sertad2a
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26850229 ~ 26853814 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223950.1
CCGAAGCCTCCGCTCGCGGGTTTCGCTGAAAGAGAGACCGGGCGTTGAAGCGCGGCACGGGAGAATCACGGCGAGCTCGCGATGCGCCTTTCACCCTCACCGGCGAGTCTAGCGTTCTGGAGCGCCACCGGACGTGAAGCTGCGTGACCGTGCGACGCGCTACATGTTGGGTAGAGGCCTGAAGCGGAAGCTGGAGccggaggaagaggaagagagcggGGTGATGAAGCCGGGCCCTCAGGAGACCTGCTTCTGGCTCCAGCGGCAGACCGTGCTCAACCTCTCTCTGCTGAAGCTGCACGGCCGGGAGCCAGGCCTGTCCCGCAGGGTGCTGATCACCAACACGCTCCGCCGCATCCAGGACGTCCCCGAGCCCCGGTCCTTCCCCGCCGGGGTCAGCCTGCCGCAGGAGGACGggcgtctgtctctctgtcgCTCTCCGGCCGTTTCCGGGCAGCCGCCGCCGCCAGCCTCTCTTCTTAAAGACGGCTTCACCTCAGCGCTGGCAGGAATCGAAGACCTGCCGGACGCCGGTGAACTCAGACACGCGGAAGCAGGTCTCTCTGAAACCGGCGGCGGCGCGGACTCGGCCTCGTCTCTCTCGGACTCTGGCCGGTTTGGCCACGCCCCGTCGCTCCTCGCCGATTTCTCATTGGACGATTTCCTGTTCACGGAACTCGACAGCTTGCTGTTCGATAACGCCCCCTGCGGACCGGCCCTGAACGCGAGCTCGGGCGCGTCTAAAGTGGTTTCCATGGTAACGGACGACCTCGTCAAGACGCTCGCCGGTTACGGTAGCGGCGGGGCGAGCCAATCAGACTTCAGACTGGACCTGAGCGAACTGGATCACATCATGGAGGTTTTGGTTGGGTCGTAACGGTcaatttgtttgtattattgtatgTGGACCGAAAGGGTTGCTATGGCGAACATACgcatatttgtgtatatttattttgatacagTATCAAAGGGCGCACAATGTACTGATATTGCAACCATTTTATAACGTTATAGAATgccatttctatttttcttgTGGAAATTTCATACGAATTacgttatttttagtattttttttaaattctaaacttaataaaaacctaaataaacttgtctttttttagttcatccttttaaaatatatttaaataattcatagaTTCAcgaaaaatacatacatttacaaaatgtttatagttaaatatagtttttatttttataaaaatgtatttatattgaatGAATTacgttatttttagtatttttagtacCCTAAATCGTCTTTCAGTTCATCCTTTTAAAACAGACCATAAATGCAGActcacacaaaaacagcattttctcttaaattattttaatttcttgtgTACACTTAAAGAAAATTTAcacacttgtttgtttgtttattttttttcctcaaagaaCCCAGGCATGCACGATTGACCTCGGTACAGGCTCTTTAGATATCATTCATCTGTATGAGTTTTCCATAGGAATTTTCCCATAACAATTTTTACATGATCCATAGTTTGACTGTACACAGTCCGAAGCCACAGTTAACTATGTAAGCAGTTCTTCTGTATATCTTTACAATGTGCAAAATCCTCCAGGAGACAGAATAAACAGTGACactactgaagaaaaaaaaaaaataagaaccaAAAGATGAGGAAAACCCGTTTCTGGCaaacatttcccatcatgcacttCTGGCGTACAGGACCGCAGTGACGGCAGACGTCCTCCGAAAGAGTCGCTTAATTATcgtaaataaaacacagatacaGAATGACCAAAACACGATGAAAACAGGGAAATGAGCAAAACCATACAGCAGATATTGGTCCCTTATTCTCAatacacctatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatatgtgtgtgtatgtgtgtatatatatatttatatttattcaagttgatcattcatttaacaattcCTTCACTACGTTATAGTCCAAAGCCAGTGGTTTcaacttacattaaaaaataaaataaaataacaataataataataaacaaccgAAAGACACGAGCAGCTAAACGCAGAGGCGTGGTTTCTATAGCTGTTGCTGGACTCGGTCTATAGACGGTCCGTGTGGAAAGCCAAGGGTTAAACTATCAGCACAACAAAAGGAGAAAGCGTCCGCTGAAGCCCGCGCGAAATCAAAGAACCTAAAACCTACAAGTAATAACAATATTGATTGTAACGTAATAGCCAGAACGGTTAAAAACTAAGGCCTTTgttacgcaaaaaaaaaagtaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223950.1 True 2354 mRNA 0.43 2 26850229 26853814

Neighbor

gene id symbol gene type direction distance location
peli1a peli1a,LOC107700844,LOC107747159,LOC107598475,LOC107709617,LOC107594259,LOC107703798 coding downstream 16475 26821073 ~ 26833754 (-)
vps54 vps54,LOC107709616,LOC107700845,LOC107598476 coding downstream 31058 26803408 ~ 26819171 (-)
slc25a23a slc25a23a,LOC107747161,LOC107594260,LOC107703801 coding downstream 52215 26787308 ~ 26798014 (-)
LOC122350383 khsrp,LOC107703803,LOC107594262,LOC107700847,LOC107598477 coding downstream 63329 26778467 ~ 26786900 (-)
crtac1a crtac1a,LOC107700849,LOC107598482,LOC107747162 coding downstream 76409 26767286 ~ 26773820 (-)
rab1aa rab1a,LOC107598472,LOC107747156,LOC105021598,LOC107666439,LOC107676578,LOC107594256,LOC107601860 coding upstream 3643 26857457 ~ 26861770 (-)
pane1 cenpm,pane1 coding upstream 16480 26870294 ~ 26871984 (-)
zgc:158803 zgc:158803,LOC107700834,LOC107747154,LOC107703792,LOC107598467,LOC107709610,LOC107594252,LOC108411937 coding upstream 18842 26872656 ~ 26878150 (-)
mri1 mri1,LOC107700835,LOC107594353,LOC107703717,LOC107598470 coding upstream 25253 26879067 ~ 26891282 (-)
cc2d1a cc2d1a,LOC107747148,LOC107594251,LOC107598465 coding upstream 39998 26893812 ~ 26907012 (-)
G6870 NA non-coding downstream 85749 26760004 ~ 26764480 (-)
G6874 NA non-coding downstream 91937 26754732 ~ 26758292 (-)
G6873 NA non-coding downstream 101273 26748723 ~ 26748956 (-)
G6827 gprc5b,gprc5bb,LOC107729503,LOC107578286,LOC107700862,LOC107598492,LOC107709629,LOC107703814 non-coding downstream 143401 26653242 ~ 26706828 (-)
G6887 NA non-coding upstream 79318 26933132 ~ 26942207 (-)
G6923 NA non-coding upstream 140624 26994438 ~ 26994699 (-)
G6926 NA non-coding upstream 152833 27006647 ~ 27007143 (-)
G6927 NA non-coding upstream 153689 27007503 ~ 27007987 (-)
G6929 NA non-coding upstream 155342 27009156 ~ 27009552 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 47275 26801910 ~ 26802954 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 326827 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 432332 26416859 ~ 26417897 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 714743 26130788 ~ 26135486 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 986442 25831324 ~ 25863787 (-)
si:ch211-286b5.5 NA other upstream 63855 26917669 ~ 26920034 (-)
LOC122349164 NA other upstream 130730 26984544 ~ 26992582 (-)
LOC122344379 NA other upstream 342424 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 386510 27240324 ~ 27255067 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other upstream 521503 27375317 ~ 27385079 (-)

Expression


Co-expression Network