LOC122330473


Basic Information

Item Value
gene id LOC122330473
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8875917 ~ 8877881 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227546.1
ATCACTCGCTGAGATGGAGAGGACGAGACTTCTCATCACGCTCatgtTTTTCCTGTTTTATCAGAAAAGCAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTCTTGGTTCATTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAACCCACTTTCATAATAGATTCAAGACAATGGGACCTGGAGGCCTTTCAGCGATTCAGTTTCATCCACAACCCCTATAATAATTCTCTTGATCTACATATTACTAATGTCACCGTCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAATAAGGTAAATGAAGATAATAAAGGCATCATCTCCTCATCTAAAGTGTACTATTATGGAAACCAAACAACTCGTCTTTCTCTGGAAAGtaagaaaaaagctaaatGCTCTGCACCTCCTGACTGTGTGCTCTGCTGGATGCTGTTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTCACTCCTGTCCTCCATCTGTGTTTACTGCTACTGTTCAGCTCAGACCTCAGGTTCTTCAGATCTACTCACAGCAGATGTTATTAAGTGGGATCTAATGGAGAAACATCAGTGTGATTTGAGGAAGACTGGAAACATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTAACATCTGAACATCCCTACGCCAAGATGTGATTCTACCTGCTCGATTTATacaactgtatttatttctttgatacTGACACTTGTCCTTGTTGAACTCATACTGTCTTTTTGTGGGCACAGTGGGCCAAGGCCATACCATACCAAACATACCAGTGTGTGCTTTGCTTTTACACGgtttgctttttgtttctttgtgtatttatattttgggcTCTGTGTAgctgtattattgtattattgtataattgttttctattttgtaataaatccatCGATTTGAAATCC
>XM_043227629.1
ATCACTCGCTGAGATGGAGAGGACGAGACTTCTCATCACGCTCatgtTTTTCCTGTTTTATCAGAAAAGCAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTCTTGGTTCATTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAACCCACTTTCATAATAGATTCAAGACAATGGGACCTGGAGGCCTTTCAGCGATTCAGTTTCATCCACAACCCCTATAATAATTCTCTTGATCTACATATTACTAATGTCACCGTCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAATAAGGTAAATGAAGATAATAAAGGCATCATCTCCTCATCTAAAGTGTACTATTATGGAAACCAAACAACTCGTCTTTCTCTGGAAAGCTCTGCACCTCCTGACTGTGTGCTCTGCTGGATGCTGTTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTCACTCCTGTCCTCCATCTGTGTTTACTGCTACTGTTCAGCTCAGACCTCAGGTTCTTCAGATCTACTCACAGCAGATGTTATTAAGTGGGATCTAATGGAGAAACATCAGTGTGATTTGAGGAAGACTGGAAACATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTAACATCTGAACATCCCTACGCCAAGATGTGATTCTACCTGCTCGATTTATacaactgtatttatttctttgatacTGACACTTGTCCTTGTTGAACTCATACTGTCTTTTTGTGGGCACAGTGGGCCAAGGCCATACCATACCAAACATACCAGTGTGTGCTTTGCTTTTACACGgtttgctttttgtttctttgtgtatttatattttgggcTCTGTGTAgctgtattattgtattattgtataattgttttctattttgtaataaatccatCGATTTGAAATCC
>XM_043227712.1
ATCACTCGCTGAGATGGAGAGGACGAGACTTCTCATCACGCTCatgtTTTTCCTGTTTTATCAGAAAAGCAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTCTTGGTTCATTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAACCCACTTTCATAATAGATTCAAGACAATGGGACCTGGAGGCCTTTCAGCGATTCAGTTTCATCCACAACCCCTATAATAATTCTCTTGATCTACATATTACTAATGTCACCGTCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAATAAGGCTCTGCACCTCCTGACTGTGTGCTCTGCTGGATGCTGTTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTCACTCCTGTCCTCCATCTGTGTTTACTGCTACTGTTCAGCTCAGACCTCAGGTTCTTCAGATCTACTCACAGCAGATGTTATTAAGTGGGATCTAATGGAGAAACATCAGTGTGATTTGAGGAAGACTGGAAACATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTAACATCTGAACATCCCTACGCCAAGATGTGATTCTACCTGCTCGATTTATacaactgtatttatttctttgatacTGACACTTGTCCTTGTTGAACTCATACTGTCTTTTTGTGGGCACAGTGGGCCAAGGCCATACCATACCAAACATACCAGTGTGTGCTTTGCTTTTACACGgtttgctttttgtttctttgtgtatttatattttgggcTCTGTGTAgctgtattattgtattattgtataattgttttctattttgtaataaatccatCGATTTGAAATCC

Function

GO:

id name namespace
GO:0032991 protein-containing complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227546.1 True 979 mRNA 0.40 5 8875917 8877881
XM_043227629.1 False 961 mRNA 0.41 5 8875917 8877881
XM_043227712.1 False 879 mRNA 0.41 5 8875917 8877881

Neighbor

gene id symbol gene type direction distance location
LOC122351709 NA coding downstream 8105 8866455 ~ 8867812 (-)
LOC122345778 dmd,LOC107692624 coding downstream 124345 8713630 ~ 8751572 (-)
LOC122351261 NA coding downstream 199302 8673994 ~ 8676615 (-)
wfs1a wfs1a,LOC107565338,LOC107692704,LOC107742510 coding downstream 233420 8634561 ~ 8642497 (-)
pde5aa LOC107692592,LOC107563895 coding downstream 253560 8609088 ~ 8622357 (-)
LOC122330624 NA coding upstream 6213 8884094 ~ 8885568 (-)
LOC122351065 NA coding upstream 9973 8887854 ~ 8889811 (-)
LOC122345830 stim2a,LOC107656659,LOC107742493,LOC107563819,LOC107714208,LOC107562986,LOC107702263 coding upstream 36343 8914224 ~ 8922591 (-)
LOC122353120 rbpja,LOC107563830,LOC107742494,LOC107702317,LOC107562987 coding upstream 49140 8927021 ~ 8932564 (-)
LOC122353124 slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding upstream 58864 8936745 ~ 8942865 (-)
G2033 NA non-coding downstream 178516 8695872 ~ 8697401 (-)
G2016 NA non-coding downstream 205113 8669413 ~ 8670804 (-)
G2010 NA non-coding downstream 241520 8631464 ~ 8634397 (-)
LOC122351284 NA non-coding downstream 427293 8446548 ~ 8448624 (-)
G1868 NA non-coding downstream 708530 8138483 ~ 8167387 (-)
LOC122351897 NA non-coding upstream 15739 8893620 ~ 8894562 (-)
G2138 NA non-coding upstream 802015 9679896 ~ 9693438 (-)
G2174 LOC107747394,LOC107562929,LOC107721426 non-coding upstream 909433 9787314 ~ 9792467 (-)
G2286 NA non-coding upstream 1378769 10256650 ~ 10256887 (-)
G2292 fat1,fat1a,LOC107562748 non-coding upstream 1429089 10306970 ~ 10307238 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 77562 8779212 ~ 8798355 (-)
G1926 NA other downstream 268122 8556040 ~ 8607795 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other downstream 375705 8492144 ~ 8500212 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 1580088 7204004 ~ 7295829 (-)
G1642 NA other downstream 1705895 7125642 ~ 7170022 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 1479300 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 1857089 10734970 ~ 10799609 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other upstream 1928688 10806569 ~ 10814075 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 2075994 10953875 ~ 10981366 (-)
G2401 NA other upstream 2175273 11053154 ~ 11053941 (-)

Expression


Co-expression Network