LOC122330624


Basic Information

Item Value
gene id LOC122330624
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8884094 ~ 8885568 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227829.1
GAGAGGACGAGACTTCTCATCACGCTCATGtATGTCTTGCTGTTTTATCAGAAAAGCAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTGTTGGTTCATTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAGCCCTCTCTCATAATAGATTTTAGGCAGGGGTTTAGATTGGGCCTGGAGGCCTTTCAGCGATTCAGTTTCATCCACAACCCCTATAATAATTCTCATGGTCTACATATTACTAACATCAGCATCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAATAAggtaaataaagatgaaaaaggCATCATATCTTCTTCAGAAGTGTACTATTATGGCTTCCAAATAACCCGCCTCTCTATGGAAGTGTGTTCTGCGCCACTGACTTCCTGTTCTGAAGGCTCTGCACCTCCTGACTGTGTGCTCTGCTGGATGCTGTTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTCACTCCTGTCCTCCATCTGTGTTTACTGCTACTGTTCAGCTCAGACCTCAGGTTTTGCAGAGATATTTGCAGCGGATGTTATTCAGTGGGATCTAATGGAGAAACATCAGTGTGATTTGAGGAAGACTGGAAACATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTAACATCTGAACATCCCTACGCCAAGATGTGATTCTACCTGCTCGATTTATA
>XM_043227913.1
GAGAGGACGAGACTTCTCATCACGCTCATGtATGTCTTGCTGTTTTATCAGAAAAGCAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTGTTGGTTCATTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAGCCCTCTCTCATAATAGATTTTAGGCAGGGGTTTAGATTGGGCCTGGAGGCCTTTCAGCGATTCAGTTTCATCCACAACCCCTATAATAATTCTCATGGTCTACATATTACTAACATCAGCATCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAATAAgGCTCTGCACCTCCTGACTGTGTGCTCTGCTGGATGCTGTTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTCACTCCTGTCCTCCATCTGTGTTTACTGCTACTGTTCAGCTCAGACCTCAGGTTTTGCAGAGATATTTGCAGCGGATGTTATTCAGTGGGATCTAATGGAGAAACATCAGTGTGATTTGAGGAAGACTGGAAACATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTAACATCTGAACATCCCTACGCCAAGATGTGATTCTACCTGCTCGATTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227829.1 True 755 mRNA 0.44 5 8884094 8885568
XM_043227913.1 False 640 mRNA 0.45 5 8884094 8885568

Neighbor

gene id symbol gene type direction distance location
LOC122330473 NA coding downstream 6213 8875917 ~ 8877881 (-)
LOC122351709 NA coding downstream 16282 8866455 ~ 8867812 (-)
LOC122345778 dmd,LOC107692624 coding downstream 132522 8713630 ~ 8751572 (-)
LOC122351261 NA coding downstream 207479 8673994 ~ 8676615 (-)
wfs1a wfs1a,LOC107565338,LOC107692704,LOC107742510 coding downstream 241597 8634561 ~ 8642497 (-)
LOC122351065 NA coding upstream 2286 8887854 ~ 8889811 (-)
LOC122345830 stim2a,LOC107656659,LOC107742493,LOC107563819,LOC107714208,LOC107562986,LOC107702263 coding upstream 28656 8914224 ~ 8922591 (-)
LOC122353120 rbpja,LOC107563830,LOC107742494,LOC107702317,LOC107562987 coding upstream 41453 8927021 ~ 8932564 (-)
LOC122353124 slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding upstream 51177 8936745 ~ 8942865 (-)
dlc1 dlc1,LOC107742489,LOC107656601,LOC107702327,LOC107562932,LOC107750042,LOC107565476 coding upstream 381967 9267535 ~ 9357022 (-)
G2033 NA non-coding downstream 186693 8695872 ~ 8697401 (-)
G2016 NA non-coding downstream 213290 8669413 ~ 8670804 (-)
G2010 NA non-coding downstream 249697 8631464 ~ 8634397 (-)
LOC122351284 NA non-coding downstream 435470 8446548 ~ 8448624 (-)
G1868 NA non-coding downstream 716707 8138483 ~ 8167387 (-)
LOC122351897 NA non-coding upstream 8052 8893620 ~ 8894562 (-)
G2138 NA non-coding upstream 794328 9679896 ~ 9693438 (-)
G2174 LOC107747394,LOC107562929,LOC107721426 non-coding upstream 901746 9787314 ~ 9792467 (-)
G2286 NA non-coding upstream 1371082 10256650 ~ 10256887 (-)
G2292 fat1,fat1a,LOC107562748 non-coding upstream 1421402 10306970 ~ 10307238 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 85739 8779212 ~ 8798355 (-)
G1926 NA other downstream 276299 8556040 ~ 8607795 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other downstream 383882 8492144 ~ 8500212 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 1588265 7204004 ~ 7295829 (-)
G1642 NA other downstream 1714072 7125642 ~ 7170022 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 1471613 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 1849402 10734970 ~ 10799609 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other upstream 1921001 10806569 ~ 10814075 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 2068307 10953875 ~ 10981366 (-)
G2401 NA other upstream 2167586 11053154 ~ 11053941 (-)

Expression


Co-expression Network