gcgrb (gcgrb,LOC107747136,LOC107572112,LOC107698219,LOC107712052,LOC107569281)


Basic Information

Item Value
gene id gcgrb
gene name gcgrb,LOC107747136,LOC107572112,LOC107698219,LOC107712052,LOC107569281
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27604178 ~ 27633774 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228661.1
CGGAGCTGATCCGCGCGCGCTCCTCGCTCGCCCGCGCGAGAGAAAGTGTTTCGCGCTCCCGCCGATCGCCGCGCGTCAGTCTGCGTGTTTGCGGTGGATTACGCGCCGCGCTGGACTAACTCTGGGATTTAGCGAGGAAGATGAGCACTTTGAGAGATGAAGCGCGCGCTGGACGCTCCTCGGGCGGTGTGATGACGAGCGAGTGATGAGCCGCAGGGAGGAATGTCCGTCTGTCTGCTGCTGGTCCTCTTCACACTCACCTCAAACGCTCAGGTGTCTTCTGGGAAATCTCTGAAGCTGCTGCAGGAGCAGTGGAGGATCTACACCAATGAGTGCGTCCAGAGCCTGAGCAGCTCTCCGCCGGCCGCAGGGCCCGTGTGTAACAGGACCTTTGATCAGTACGTGTGCTGGCCCGATGGACCGCCGGGAACCACGGTCAACGTGTCCTGCCCGTGGTACCTGCCCTGGTACCGGAAAGTGCAGCGGGGCTTGGTTTACCGTGTGTGTGGCGCTGACGGCCGATGGGCTCGTGGGAAAAACACCAGCGAGTGTGAGCAGGACGACCCTGGACAGaagcAGTACGGTCAGATCCTCAGTAAGTTCAGAGCCATGTACACAGTGGGATACTCTCTGTCTCTGGCGGCGCTGACCCTCGCTCTGGCCATCCTCATCAGCTTCAGGAAGCTGCACTGCATGAGGAACAACATCCACATGAACCTGTTCGGCTCCTTCATCCTGCGCGCCGCCTCCATCCTGGTGAAAGACGCTCTGCTGGACCGGATGAACAGCGCTCGGAGCGGCCCGCATCACTTCCAGGGCCAGCGCCGGCTCAGCGCTCAGACGCTGAGCGGATGCCGGGCTGCGATGGTGATGATGCAGTACAGCGTCATGGCCAACAACTACTGGCTGCTGGTGGAGGGTCTGTATCTCCACAGCCTGCTGGTCATCACCGTCTTCTCCGAGAGGAACTACTTCTACCTTTACCTCTGCATCGGCTGGGGTGCTCCGCTCATATTCGTGCTGCCGTGGATGACGGTCAAATACCTGTATGAAAACGAAGAATGCTGGGAAAGGAATATCAACATGGGCTACTGGTGGATCATCCGTTCTCCCATACTGTTCGCGTATCTGATTAATTTCATCATATTCATTCGCATAATAAAGATTCTGATGTCCAAGCTGAAGGCGCATCAGATGAGATACACCGACTACAAGTTCAGGCTGGCCAAGTCCACGCTCACCCTGATTCCTCTGCTGGGGATTCACGCCATCCTCTTCACCTTCGTCATCGATGAGTCCGTGCCGAAGGAGTCTCTTCTGAGGCTCATCCGCCTCTTCTACGACCTCCTTTTCAGCTCCTTCCAGGGTCTGCTGGTGGCCATCCTTTACTGCTTCGTCAACAAAGAGGTCCAGAGCGAGATGCTGAAGAAGTGGAAGAGGTGGAAACTAGGCAAGGACATTGAGGAAGAGTACCGTCACACCCACAGCCAGACGCCTCATGCCAAAAGTGGCAGCATGGCTCCGGCGATGACCCACGAATGCCCCGAAACCCCAGAGCTGGCGGCCTCGGCAGAGTCCCAGCGTCTGGTGATGGGTCTTCAGAACGGAGCGAGCCGGAACCGGGGCCGTGCCAGGCTGCAGCTGACCTCCGAGCCACAGGAGGGCGCTAGTAACTGCAGCTCTCTGACAGAAGACATTTGTCTGGAAGAGCGTCCCCTCAACAGTGAGTGCTCAGCAGCGGTGACAGAAACCAACGTTTGAGGTTTTTAACACTGATGGATCAGATACGGTCTTCACGTTACCAAACAGCATGGAGAGGTGGATCTGTTAACCCTTAAAAACAAATCGCAGTAATCTCCTGAGTTGGTAAATTACcaaatagtattatttattgacGTCTTCTTAAGCTACGGGCACATTAACCACAGcttggtaattttttttttaagtaacctGGACATTTTCTTGTCAATGAAAAAGTAATTGCTAGTCACTTGGGAAAAGTAATTAAAAGCGTAACTTGCGTTATTGTAATGTCTCTCATCAACACAGAAATCCACATGAGTTCGAAAAAGTTGCCTTATATTCAAGTAGTTCACATTAAATTGCTGCGTTGACCAACAAAAAGCTGCTTAGTCTGAATGTGTCTTGAACATGT

Function

symbol description
gcgrb Enables peptide hormone binding activity. Acts upstream of or within regulation of glucose metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in brain; intestine; liver; and male organism. Human ortholog(s) of this gene implicated in Mahvash Disease and type 2 diabetes mellitus. Orthologous to several human genes including GCGR (glucagon receptor).

NR:

description
PREDICTED: glucagon receptor isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04583 GCGR; glucagon receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228661.1 True 2158 mRNA 0.54 15 27604178 27633774

Neighbor

gene id symbol gene type direction distance location
LOC122344130 NA coding downstream 162416 27438436 ~ 27441762 (-)
LOC122344204 NA coding downstream 165899 27431730 ~ 27438279 (-)
LOC122349201 NA coding downstream 178031 27422954 ~ 27426147 (-)
LOC122344221 LOC107574524,LOC107578363,LOC107574523,LOC107576205 coding downstream 182456 27417953 ~ 27421722 (-)
LOC122344156 LOC107578363,LOC107574523,LOC107576205 coding downstream 210300 27379998 ~ 27393878 (-)
si:dkey-27j5.5 si:dkey-27j5.5,LOC107707713,LOC107659763,LOC107571882 coding upstream 90404 27724178 ~ 27726902 (-)
LOC122352823 NA coding upstream 125444 27759218 ~ 27765006 (-)
LOC122352815 NA coding upstream 160696 27794470 ~ 27803049 (-)
LOC122349272 NA coding upstream 254045 27887819 ~ 27890576 (-)
LOC122349282 NA coding upstream 306969 27940743 ~ 27942269 (-)
G7010 NA non-coding downstream 8334 27593721 ~ 27595844 (-)
G7009 NA non-coding downstream 11728 27591373 ~ 27592450 (-)
G7000 NA non-coding downstream 105435 27497894 ~ 27498743 (-)
G6996 NA non-coding downstream 155620 27445471 ~ 27448558 (-)
G6961 NA non-coding downstream 274851 27316372 ~ 27329327 (-)
G7012 NA non-coding upstream 12249 27646023 ~ 27646725 (-)
G7014 NA non-coding upstream 14153 27647927 ~ 27648286 (-)
G7106 NA non-coding upstream 102804 27736578 ~ 27745295 (-)
G7125 NA non-coding upstream 147339 27781113 ~ 28001479 (-)
G7128 NA non-coding upstream 157027 27790801 ~ 27972210 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 219099 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 349111 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 401550 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 611596 26984544 ~ 26992582 (-)
si:ch211-286b5.5 NA other downstream 684144 26917669 ~ 26920034 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other upstream 121008 27754782 ~ 27939452 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other upstream 258127 27891901 ~ 28076645 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 587125 28220899 ~ 28223247 (-)
G7475 NA other upstream 610354 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 757265 28391039 ~ 28392053 (-)

Expression


Co-expression Network