cep44 (LOC107676682,LOC107558780,LOC107670817,LOC107737107,LOC107752226)


Basic Information

Item Value
gene id cep44
gene name LOC107676682,LOC107558780,LOC107670817,LOC107737107,LOC107752226
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 18687317 ~ 18693388 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043233886.1
GGGTTGAACCGTCGTCTCCGGTACATGGAAACCAATCACAACAAACCCGTATGTTTCAGCGGCAAAAACAAAAGGGAAAATTAGCAATAATTCTGGATTACTATAAAAATCAGCCAACGGCAGAGATGACCACTGGTGATCTGAAAGGATGTCTGAGAAAGCTGGAAGCGTCTCTCCGTTCTCTGAAGTATCCCGGAGAAGTGGACTATCAAAGATTGGCTGTGGGAGATCCATCGGCTTGTCTTCCTGTTGTGAGCTTTGCCTTCACATCCTTTTCCCCTTCACTCACAGAGCACCTGGTTGATTATGGCGTGGAACTAACCGGATTGAATGATTTACGATTTATTGAGAATGTTTACAAGGTCTTGCGGGATGTTTTCAGCTATAAGCCACTGTTAACCAAACAGCAGTTTCTTCAGTTTGGCTTTGCTGAGAGGAAAGTCATCATTCTCTGTGATATCATTGGCCTTATTCTCAACAAGCACAAAGAACTCACAAAAGAAAGCAAGCATGTCAGTAAACCAAAGAAAAGGCCACAGTTCAAGAGCTGCGCTAAATATGAGATCTCTTCTGCTGAGAGTAACTCACTGGGGTTAACAGCCCTGACAAAGCAGCCACTGGTCGAAAGGCATCTTGGCAGCAGCTCAGCACCAACACAGATCAGACGCTCCTCAGAAGAGCAGCCCCAGCAGGATGAGGAAGCCGAAAAGAGGGACTCAGACTGCAACTCGTCTCAAACTGCAAATTCAATTGAGTGCGTTTTAGAGAGCCAGCTGAGGGGCGTAGAAGCAAGTCTTCTGGATAGTGTTGCCAGACTGGAGCAGCGATTGGCTCTTATGGAACGCAGGATACATGCTCTGGAGAAAAGCTCGGCTGGCAAGATTATCATTGAGAGCAACCGGTGGGAGAACCTGGAGAGTCGCGTGCTGCTGCTGGAGACCAGGCAGGCGTTGACCTCAGCACAGGGTCTAACTTCGGGAGATGGTGTCCTCAGCACAGACAATAAGTTCAAAGAGGACACAGTATCTGCAAGTGGCATTTCTGCTGTGATACATCcaccatgtgacatcagtgataATGGACACGCTCCAGTCAGTTCTCCTCCTACAGCTCCCCAGAACTTTAAAGAAAGGCTGGACAGAATAGTTCACATGATGAAGGATACATCtaactttcttcaaaacataGAACCCACAATGTAAATTGAATCTCAGAACAGAggaatgtgttttaaagaaataaaatttgtcGTTATTACCCACCCTCATATTGTTCCAGAATAAGTATAACAAAGACTTTCTGATAAACAGAGCAAAATTGTAATTCCTTAAAAGTATGGCCCAATACCATATGGTGGCAACTGTATTTCGAATAAATTTAATAGATATTTCAGTGGTTCTTGTTCATGAAAAAAATGAGTAGTGGCACCATGTTTGATTTGTTATCAGTTATCAGAAGTGACAGACAGGTAAAACTCctacatttcattctgtttcaCATACAaagattattttgtaaattgtatgggtgtatatatatgtatatttttttatacaccCTCCTACATATCCTGGAGCTGTATTAACATAACATGAGTGTCTTGTCCTCTAGATGTCACTGCCACCCATTTAAAACCTAATGGTAAATTACTTCATGGCTCCCTCTGTAGTCAGTTTTGTGTATTGCTCCCTGTCCTGAACGCTGCATCAGTCCATTGCCACACAACAGTTACGAATTCACTTCAGTGTCAAACAAAGTCAAATGTGTAATGATCATGTCtttgtgcattaataaatatgacatttttttg
>XM_043233897.1
CGGTCCTGTGACACTATCATTCATCAGGTCACTCGCTCCTCCTGTCAGTCTCTCCGCCTCCTCGACCACTCTGGCCAGACTGACGTTTCTTGTTATTGGTGGAAGTGACGCGACTCTCTCAGAGTAAATCAGCCACAGGCAGAGATGACCACTGGTGATCTGAAAGGATGTCTGAGAAAGCTGGAAGCGTCTCTCCGTTCTCTGAAGTATCCCGGAGAAGTGGACTATCAAAGATTGGCTGTGGGAGATCCATCGGCTTGTCTTCCTGTTGTGAGCTTTGCCTTCACATCCTTTTCCCCTTCACTCACAGAGCACCTGGTTGATTATGGCGTGGAACTAACCGGATTGAATGATTTACGATTTATTGAGAATGTTTACAAGGTCTTGCGGGATGTTTTCAGCTATAAGCCACTGTTAACCAAACAGCAGTTTCTTCAGTTTGGCTTTGCTGAGAGGAAAGTCATCATTCTCTGTGATATCATTGGCCTTATTCTCAACAAGCACAAAGAACTCACAAAAGAAAGCAAGCATGTCAGTAAACCAAAGAAAAGGCCACAGTTCAAGAGCTGCGCTAAATATGAGATCTCTTCTGCTGAGAGTAACTCACTGGGGTTAACAGCCCTGACAAAGCAGCCACTGGTCGAAAGGCATCTTGGCAGCAGCTCAGCACCAACACAGATCAGACGCTCCTCAGAAGAGCAGCCCCAGCAGGATGAGGAAGCCGAAAAGAGGGACTCAGACTGCAACTCGTCTCAAACTGCAAATTCAATTGAGTGCGTTTTAGAGAGCCAGCTGAGGGGCGTAGAAGCAAGTCTTCTGGATAGTGTTGCCAGACTGGAGCAGCGATTGGCTCTTATGGAACGCAGGATACATGCTCTGGAGAAAAGCTCGGCTGGCAAGATTATCATTGAGAGCAACCGGTGGGAGAACCTGGAGAGTCGCGTGCTGCTGCTGGAGACCAGGCAGGCGTTGACCTCAGCACAGGGTCTAACTTCGGGAGATGGTGTCCTCAGCACAGACAATAAGTTCAAAGAGGACACAGTATCTGCAAGTGGCATTTCTGCTGTGATACATCcaccatgtgacatcagtgataATGGACACGCTCCAGTCAGTTCTCCTCCTACAGCTCCCCAGAACTTTAAAGAAAGGCTGGACAGAATAGTTCACATGATGAAGGATACATCtaactttcttcaaaacataGAACCCACAATGTAAATTGAATCTCAGAACAGAggaatgtgttttaaagaaataaaatttgtcGTTATTACCCACCCTCATATTGTTCCAGAATAAGTATAACAAAGACTTTCTGATAAACAGAGCAAAATTGTAATTCCTTAAAAGTATGGCCCAATACCATATGGTGGCAACTGTATTTCGAATAAATTTAATAGATATTTCAGTGGTTCTTGTTCATGAAAAAAATGAGTAGTGGCACCATGTTTGATTTGTTATCAGTTATCAGAAGTGACAGACAGGTAAAACTCctacatttcattctgtttcaCATACAaagattattttgtaaattgtatgggtgtatatatatgtatatttttttatacaccCTCCTACATATCCTGGAGCTGTATTAACATAACATGAGTGTCTTGTCCTCTAGATGTCACTGCCACCCATTTAAAACCTAATGGTAAATTACTTCATGGCTCCCTCTGTAGTCAGTTTTGTGTATTGCTCCCTGTCCTGAACGCTGCATCAGTCCATTGCCACACAACAGTTACGAATTCACTTCAGTGTCAAACAAAGTCAAATGTGTAATGATCATGTCtttgtgcattaataaatatgacatttttttg
>XM_043233907.1
TCACAACAAACCCGTATGTTTCAGCGGCAAAAACAAAAGGGAAAATTAGCAATAATTCTGGATTACTATAAAAATCAGCCAACGAGATGACCACTGGTGATCTGAAAGGATGTCTGAGAAAGCTGGAAGCGTCTCTCCGTTCTCTGAAGTATCCCGGAGAAGTGGACTATCAAAGATTGGCTGTGGGAGATCCATCGGCTTGTCTTCCTGTTGTGAGCTTTGCCTTCACATCCTTTTCCCCTTCACTCACAGAGCACCTGGTTGATTATGGCGTGGAACTAACCGGATTGAATGATTTACGATTTATTGAGAATGTTTACAAGGTCTTGCGGGATGTTTTCAGCTATAAGCCACTGTTAACCAAACAGCAGTTTCTTCAGTTTGGCTTTGCTGAGAGGAAAGTCATCATTCTCTGTGATATCATTGGCCTTATTCTCAACAAGCACAAAGAACTCACAAAAGAAAGCAAGCATGTCAGTAAACCAAAGAAAAGGCCACAGTTCAAGAGCTGCGCTAAATATGAGATCTCTTCTGCTGAGAGTAACTCACTGGGGTTAACAGCCCTGACAAAGCAGCCACTGGTCGAAAGGCATCTTGGCAGCAGCTCAGCACCAACACAGATCAGACGCTCCTCAGAAGAGCAGCCCCAGCAGGATGAGGAAGCCGAAAAGAGGGACTCAGACTGCAACTCGTCTCAAACTGCAAATTCAATTGAGTGCGTTTTAGAGAGCCAGCTGAGGGGCGTAGAAGCAAGTCTTCTGGATAGTGTTGCCAGACTGGAGCAGCGATTGGCTCTTATGGAACGCAGGATACATGCTCTGGAGAAAAGCTCGGCTGGCAAGATTATCATTGAGAGCAACCGGTGGGAGAACCTGGAGAGTCGCGTGCTGCTGCTGGAGACCAGGCAGGCGTTGACCTCAGCACAGGGTCTAACTTCGGGAGATGGTGTCCTCAGCACAGACAATAAGTTCAAAGAGGACACAGTATCTGCAAGTGGCATTTCTGCTGTGATACATCcaccatgtgacatcagtgataATGGACACGCTCCAGTCAGTTCTCCTCCTACAGCTCCCCAGAACTTTAAAGAAAGGCTGGACAGAATAGTTCACATGATGAAGGATACATCtaactttcttcaaaacataGAACCCACAATGTAAATTGAATCTCAGAACAGAggaatgtgttttaaagaaataaaatttgtcGTTATTACCCACCCTCATATTGTTCCAGAATAAGTATAACAAAGACTTTCTGATAAACAGAGCAAAATTGTAATTCCTTAAAAGTATGGCCCAATACCATATGGTGGCAACTGTATTTCGAATAAATTTAATAGATATTTCAGTGGTTCTTGTTCATGAAAAAAATGAGTAGTGGCACCATGTTTGATTTGTTATCAGTTATCAGAAGTGACAGACAGGTAAAACTCctacatttcattctgtttcaCATACAaagattattttgtaaattgtatgggtgtatatatatgtatatttttttatacaccCTCCTACATATCCTGGAGCTGTATTAACATAACATGAGTGTCTTGTCCTCTAGATGTCACTGCCACCCATTTAAAACCTAATGGTAAATTACTTCATGGCTCCCTCTGTAGTCAGTTTTGTGTATTGCTCCCTGTCCTGAACGCTGCATCAGTCCATTGCCACACAACAGTTACGAATTCACTTCAGTGTCAAACAAAGTCAAATGTGTAATGATCATGTCtttgtgcattaataaatatgacatttttttg

Function

NR:

description
PREDICTED: centrosomal protein of 44 kDa isoform X2

GO: NA

KEGG:

id description
K16761 CEP44; centrosomal protein CEP44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043233886.1 False 1810 mRNA 0.42 11 18687782 18693388
XM_043233897.1 True 1829 mRNA 0.43 11 18687317 18693388
XM_043233907.1 False 1771 mRNA 0.42 11 18687817 18693388

Neighbor

gene id symbol gene type direction distance location
galnt7 galnt7 coding upstream 89680 18584156 ~ 18597637 (+)
trnas-aga NA coding upstream 108486 18578750 ~ 18578831 (+)
galntl6 si:ch211-15e22.3,galntl6,LOC107670789,LOC107676688 coding upstream 109730 18431138 ~ 18577587 (+)
sparcl1 sparcl1,LOC107550753,LOC107742536,LOC107670764,LOC107665481,LOC107598725 coding upstream 360456 18304771 ~ 18326861 (+)
fam193a LOC107742534,LOC107550738,LOC107671391,LOC107734551,LOC107665478,LOC107598726 coding upstream 382621 18285790 ~ 18304696 (+)
wdr17 wdr17,LOC107670895,LOC107676687 coding downstream 146562 18839950 ~ 18858945 (+)
spcs3 spcs3,LOC107752235,LOC107670941,LOC107550835,LOC107737105,LOC107676690,LOC107558782 coding downstream 175294 18868682 ~ 18872848 (+)
tenm3 LOC107737101,LOC107670970 coding downstream 497705 19191093 ~ 19434722 (+)
irf2a irf2a,LOC107671024,LOC107550872,LOC107748823,LOC107559652,LOC107737100,LOC107684969 coding downstream 770912 19464300 ~ 19469429 (+)
sod3b LOC107671542,LOC107748835,LOC107574198 coding downstream 831460 19524848 ~ 19526586 (+)
G4331 NA non-coding upstream 87658 18598356 ~ 18599659 (+)
G4296 LOC107670772,LOC107742537,LOC107551986,LOC107734553,LOC107665480,LOC107598727 non-coding upstream 375976 18309934 ~ 18311341 (+)
G4166 nr3c2,LOC107550687,LOC107670737,LOC107742541,LOC107654985 non-coding upstream 472233 18213305 ~ 18215084 (+)
G4105 NA non-coding upstream 940218 17745851 ~ 17747099 (+)
G4099 NA non-coding upstream 1039855 17644218 ~ 17647462 (+)
LOC122340556 NA non-coding downstream 781 18694169 ~ 18717095 (+)
G4345 NA non-coding downstream 12821 18706209 ~ 18708429 (+)
G4356 NA non-coding downstream 21559 18714947 ~ 18715231 (+)
G4360 glra3,LOC102780741,LOC101174559,LOC102299625 non-coding downstream 29687 18723075 ~ 18723295 (+)
G4361 NA non-coding downstream 53846 18747234 ~ 18747753 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 402673 18247250 ~ 18284644 (+)
lsm6 lsm6 other upstream 788771 17896535 ~ 17898546 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other upstream 1076572 17551473 ~ 17610745 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other upstream 2617402 16064271 ~ 16069915 (+)
G3647 NA other upstream 3033936 15653093 ~ 15653381 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other downstream 827696 19521084 ~ 19522399 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other downstream 1022165 19715553 ~ 19777050 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other downstream 1449073 20142461 ~ 20145856 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other downstream 1548430 20241818 ~ 20243349 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 2628074 21321462 ~ 21361440 (+)

Expression


Co-expression Network