lap3 (lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534)


Basic Information

Item Value
gene id lap3
gene name lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11636160 ~ 11642208 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235336.1
TCAGTAGCTGCGCCTGTGAGCGATTTTCAACCTTTTATGTCACGTGTGGCTTTCTAAGGTTTATCTCCATCACGGTTGAGTCTGTTTCATAACTTTAGGAATAATGTTGATACCGTTCAGAAGGGCGTTGCTTACTGTAATCCGAAAACACAACTGTAGACTTTTTTCAAAGTCTAGTACCGCTTCCAGCACAAGAAAAGGTTTAGTTCTCGGCGTGTATGAGAATCAGCCAAACAATGACGGGATACATTTCACAGAGGCAGCGGCGGCATTTGACACCTCGATCTCTGGAAAACTGTCAGAAATGCTGTCGATGTCTGGACCTCCCCTGAAAAAAGGCAAGAGCAGGATCTTCTATGGTTTGCATCAGGATTTCCCTAGTGTAGTTGTGGTTGGTCTTGGTAAGGGCGACGCAGGTGTGTGTGGAAAAGAAAACTGGGACAACTGTAAGGAAAACATTCGTGCAGCTGTATCAGCGGGCTGCAGGCAGCTTCAGGACCTGGAAATAGCTCATGTGGAGGTGGACCCTTGTGGAGATGGGCAGTCAGCAGCAGAGGGCGCTGTGCTCGGGCTTTTTGAATACGATGAGCTCAAAACCAAGAAGAAGGTCCGTGTCACAACCCAACCGTACAGGAGTGTGGATTCAGCAGCATGGCAGAAAGGTCTTCTTTATGGGGACGGGCAGAACCTGGCTAGACAACTGATGGAAGCTCCAGCCAATCACATCACTCCCACTGTATTCGCAAACACTATAGAGCAGAAACTCTCACCCTTTGCTCACAAAGTGGCTGTCCACAAGAGGCCTCAGTCTTGGATTGAGAGTGAGCAAATGGGGGCTTTTCTGAGCGTTTCTAAAGGCTCAGAGGAGCCCCCTATCTTTCTGGAGCTGCATTACAAAGGCAGTTTAGACTCTGCCCAGCCTCCTCTTGTGTTGGTGGGAAAAGGAATCACCTTCGATAGCGGTGGGATCTCTCTGAAGCCTTCTTCTGGCATGGATGCCATGAGAGCAGATATGGGTGGAGCAGCCACTGTGTGTTCTGCTGTAGTAACGGCAGCAGCTTTGAAACTCCCCATCAATATCATTGGTTTGGCACCACTCTGTGAAAACATGCCTAGTGGAAAAGCAAATAAACCAGGCGATGTTGTCCGTgccaaaaatggcaaaaccaTTCAGATTGACAACACTGATGCGGAGGGCAGACTGATTTTGGCTGATGCTCTGTGTTATGCTCACAGTTTCAAACCCAGagcaataataaatgcagctacGCTTACAGGTGCCATGGATGTGGCCTTAGGTTCTGCTGCTGCAGGCGTGTTTACtaactctgattggctgtgggAGCGGCTGCATAAGGCAAGCATTGTTACTGGTGACAGGGTGTGGAGGATGCCACTGTTTCACCATTACACCAAACAAATAACAGAGAGCGCTCTGGCAGATCTGAACAACATTGGAAAATATAGCCGTTCAGGTGGCGCCTGCACTGCCGCAGCCTTCCTGAGAGAGTTTGTGACAGCTGATCATTGGGCTCACCTCGACATTGCTGGAGTCATGACCAATAAGGATGAAGTTCCATACCTGAGAAAAGGAATGTCTGGAAGACCTACACGTACTTTGGTGGAGTTTGCTGCTGGTTTGGCCTCTGAACCCTAATGTGACCATTGTGAACTTCGGCTTGGCTGCCTCGGAAATACAGTATATTCATGATGATCAGTGTTCAGAACGATTATAAATACGATTGCTGCTGAAATTAGCAGACACTTAGCAATAAGTGATCAACATGGTGACAGGATTAAAAACGTCATCGCTGAAGAAACGTTTAGTTCCAAGAGCAGAAAACAGTATCTAATGGAAACTGCTGACAAGCACTCCTAGACTGTTTCTAAAATCTGATTACTTTGTAACAGGCAACAACTGAAACTAGAGAGTGAAAGACAAGTTTGCTGGActgcctttttaaaatgatattgcattaaaaagtgGCAGGGAACTTTTCAAATTCTGTAATAAATTGAATGGTACCAGTGTTATACcatgtataaatgcacaaaatacagGGGTCAATAAATTCATGTGGCAATGAAGTGAGATAAATGTCATATTGAAAGACTAgtgtgtagatttttttttgccttgaaaACAAAAGTTGTATTACCTAAACAAATGAAATCTATTTTCTTCCATTTGTTTCATTAAACACTACATATATGCTTAAAA

Function

symbol description
lap3 Predicted to enable manganese ion binding activity and metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in cytoplasm. Is expressed in several structures, including alar plate midbrain region; head; immature eye; midbrain; and musculature system. Orthologous to human LAP3 (leucine aminopeptidase 3).

NR:

description
PREDICTED: cytosol aminopeptidase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function
GO:0008235 metalloexopeptidase activity molecular_function

KEGG:

id description
K11142 LAP3; cytosol aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235336.1 True 2221 mRNA 0.45 13 11636160 11642208

Neighbor

gene id symbol gene type direction distance location
rbm47 rbm47,LOC107656158,LOC107754149,LOC107702361,LOC107746010 coding downstream 4517 11608561 ~ 11631643 (-)
trnai-aau NA coding downstream 137802 11498285 ~ 11498358 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding downstream 144127 11489952 ~ 11492033 (-)
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding downstream 242334 11383791 ~ 11393826 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding downstream 253803 11336559 ~ 11382357 (-)
kitb kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536 coding upstream 12696 11654904 ~ 11666734 (-)
ecpas kiaa0368,LOC107702367,LOC107551559,LOC107656759 coding upstream 51309 11693517 ~ 11710803 (-)
polr1e polr1e,LOC107754182,LOC107754175 coding upstream 82919 11725127 ~ 11729264 (-)
tma16 tma16,LOC107754160,LOC107551564,LOC107656272 coding upstream 174268 11816476 ~ 11818872 (-)
grhprb grhprb,LOC107702374,LOC107656243,LOC107754183,LOC107591546,LOC108444366 coding upstream 204799 11847007 ~ 11850655 (-)
G2532 NA non-coding downstream 437352 11198578 ~ 11198808 (-)
LOC122347981 NA non-coding downstream 629256 11004773 ~ 11006904 (-)
G2391 NA non-coding downstream 637075 10998334 ~ 10999085 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 770112 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 796858 10837968 ~ 10839302 (-)
G2630 NA non-coding upstream 69765 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 71236 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 73925 11716133 ~ 11716935 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding upstream 77520 11719728 ~ 11720175 (-)
G2635 fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540 non-coding upstream 78093 11720301 ~ 11721030 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 55443 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 123327 11510439 ~ 11512833 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other downstream 224447 11407565 ~ 11411713 (-)
LOC122343263 NA other downstream 239584 11395734 ~ 11396576 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other downstream 343112 11242031 ~ 11293048 (-)
apela NA other upstream 141421 11783629 ~ 11788666 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 455702 12097910 ~ 12117383 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other upstream 695754 12337962 ~ 12366108 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 1261991 12904199 ~ 12926482 (-)
smim18 NA other upstream 1326885 12969093 ~ 12973012 (-)

Expression


Co-expression Network