LOC122342104 (LOC107689469,LOC107551743,LOC107719777,LOC797711,LOC107711522,LOC107567046,LOC107692200)


Basic Information

Item Value
gene id LOC122342104
gene name LOC107689469,LOC107551743,LOC107719777,LOC797711,LOC107711522,LOC107567046,LOC107692200
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21676087 ~ 21679530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235930.1
GACACGCAGCGGGGAATCCTCTCACTGGAGACAATGAATGGGGAGGAGGGCTGATCGGTGAGACGGAGTGTATAAAAGCCGAGCGAAGGGAAGCCGTTGGTGTGAGAATCAACAGATCTACACATCTACAGATAGCTGGAGAGCTATATTACCTTGACGCAGATCTCAAAAAGGGGGAATTCCaaagtatttacatttgttttttggaCGAACGCCTTCACGGACTTAACTATCGGACCGGTTTTTTGCTCTTTCTTGTGTTTGCAATACCCCCTTATCAGTAACCTGCTCGGACTGACAGCCATTGGAAAGCCATTCACGGAAAGATGCTTAATAACATGGATTTGAACTCTCAAGATTCTTTCTACTCCCAGTTTGAAAACTGTAACAGTTCTGCGATAGGGATGGAAACTCACGGCTCCAAAGACAGCCAGGATGTTTTCATGGATTCGGGAAGGACAGCACCTGCCCAGTTTGCACACGGGGCGCCTATTACCCCCAAAACGGAGCCCACGAGTACAGATCAGTATAACTCTTGTCAGGGTCCGAAAGAAAGCTACGCAACCTCCCTAGCGTACTCAGGCAGCTTCTATGTGGAGACATCTCAAGGAACACCTTGCAGCACGGAAACACTGCTCAACATGATCACCGAAATCGTTGGCATCTCAACTACCCCTGTGTCGGACGCGCATCAGTGTGCAGACGGAACGATGAACGCGAGCCGTAGCAGCTTCGGCGACGAGGGGGTCCAGACGCAGGCCTCCACCTGCACCAGCCCTCCGCTGTATTCCCCGGGACAGCCAGGACACAGCTACCCGGATTCCCAGACCGCCACGCAGGCCCAAGACTCGGCTACGGCGCATTTAAACTTTGCCTCCTCGGCGCAAGACGCGGAGCCGCTGTCCGAGAGCGCGACGTTCCCGGTGGTGATCAAAAACGAATTCGAGAGCAGCTGCTACGAGTGGGGGACCTTCAATAAGTCGTACTTGGATGAAGGCTTCCAGTCAGAGCCGTTCTCCATGTCGAATAGTTTTCAAGCTGATCAACAACAGGTGGACGTCAAAGAActtttggactcttattctccCATTTGCACTAACCCAGAGACCGAATTCAAAGTGGAGAGTACCCTTAAACAGGAGCAGTGCTTTGGAGATACTTGCACACAGGGCTTCAGCGCTCCCATGTTTAACTACCCCACTCCAGTTATGGATATCCCCCCCACCAGTCTTTTAAAACCGaccatttttccaaatattgaACTCCAGTCGAGTTGCGACACAACCTACTCGACTTCCACAATAGACTCGGTACTGTATTCATCGTTATTGCCGGAGTCTTTCAGTCAAACTTACACGCGGGCTCAGAAGCCTAGTCGCGTAAGAAAGAGCCCCGCTTCCTCTACCGGACCGGCCAAGGAGAAGCCCTTCACGTGTCCCATGGAGACCTGCGACCGGCGCTTCTCGCGGTCGGATGAGCTCAACAGGCACATCCGCATCCACACGGGACACAAACCTTTCCAGTGCCGCATCTGTTTGCGGAGCTTCAGCAGAAGCGACCACCTGACCACGCACACCCGCACTCACACCGGCGAGAAGCCCTTTTCTTGCGACGTGTGCGGCAAACGCTTTGCCAGGAGCGACGAAAGGAAACGGCACGGTCGGGTGCACctcaaacagaaagaaaagatgGAGCTGAAGCCACAAGTAGTCAACGCGTGGCCGTTCACTTTGCCCGAGGCCATTTAAGAGGGGCGGTGAGCGCTCCTTGTGCGTGATGTCAAATCTTACCGTCTTGGAAGATTCGAGCTTACTAAAACAGTTGCTTAGGCTACAGATCACCACTCCAAAAGCTCAAGCGAACGTCGTGGCAACTGATTCAAGCGACCCGCATGAGCGTAAAGGTCCACTGAGGCGACggatccctttttttttttgcgaaatAGGGAATAGGTAGAATTTTAAAACTGGACCTCCCACATTGAACCTTGCGTGCGGCTTGGGGTATGTGCAGCAAGCGCATAAACTTAAAtcgagtgtttgtttgtttttttatttataatttgtccTCGATCGTTATATTTCTTAATCGAGGAGCGTGTTTTGCAGAACACACGAACTGCAGTTCAGCACTTTCACTATGGAACAGCTCCAACCTCGACCTTGCATTGTAATGCGGCAGTAAAACGCACAGCTGGAATGTATTGCACTTATCTCCACTTtcgaacttaaaaaaaaaatgtttcaattcgTGCTTTTTGGTCTTTTCTATTCTAACGCTGTCACCTGTTTAAagaattctttaaaatgcatgtaaatgtttacGTGATATTAATAATCACTGATAGATGCTTCATAGCACAAGTCAGATTTACCTCGTTTTACAACATGGTGGCATTATGGATTCATTTGTGCCAAGGTTTTTACAACGTATTTTCCCCTTTATATCTGTTTCATTTTGTTGCTATGCTCTATCGATTAGTAATTGTGTTGTACAATTAAACAATTCAGTTCTACTGTTGTCAAATTTACACAGCGAGTGggaagaaataaatacatttatatgccaatgatcatttgtatttttctaaCAAGTgctactttttacattttattttcaactgaaagactatttatatctttattttcaaTGTGTCCCTTGTGTTATGGAAAACACAGGGCACGCGTATAAGATGTCTTGAATTTCTCCAGTCCATAATTTGAATGTATTAAGTCGTTTTTAATACCACTGTCTACCCTAGATATCTGCTATTCCATAACAGGTActctcgttttttttgttttgtttttttttttttaccatagcACAATTGTGTGTTATTGTGAGACCATGTGACCCTAATTCATGAGATTTGAATTATCCAGTTCACACGGCTCCTATATTTTGTGATGTGTTAAGAAAAAAGTAGAATAGCACAGGGTTCGACAATGCTGTTGAGTGATTAGAAAGCATACGTTGCTGCAGTTTTCAATAGTTCTTTCACATGATACTAGAACGGTTTCAACATGCCTTTCAGTCTAAAAGCTTTTGTATTGTACTAGCCGAATTATTCAGTAGAGGTAATGgggaaaatgtagaaaatgtgaACTTGCCTtaagttataataattatactgCAGAAATGATTTTGTACATATCAAGACCGTTTATACGCAATACTTTGGATGAACATtgatgtttgttatttttatgacgaatatttatgaataaaacaatttcttGAGGTGTTTAAGGAGAAA

Function

NR:

description
PREDICTED: zinc finger and SCAN domain-containing protein 32-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235930.1 True 3259 mRNA 0.45 2 21676087 21679530

Neighbor

gene id symbol gene type direction distance location
fbxo41 fbxo41,LOC107689471,LOC107692170,LOC108260496 coding downstream 12520 21622365 ~ 21663567 (-)
smox smox,LOC107689473,LOC107551688,LOC107551695,LOC107692173 coding downstream 98718 21568102 ~ 21577369 (-)
LOC122342190 LOC107689477,LOC797212,LOC107682957 coding downstream 128021 21539766 ~ 21548066 (-)
LOC122348874 LOC107552383 coding downstream 260243 21411863 ~ 21415844 (-)
LOC122349971 lrrtm2,LOC107680618,LOC107750357 coding downstream 291163 21381701 ~ 21384924 (-)
mogs mogs,LOC107719770,LOC107689467,LOC107551727,LOC107567052,LOC107692169 coding upstream 7697 21687227 ~ 21691373 (-)
si:dkey-56e3.3 LOC107719778,LOC107689468,LOC107552374 coding upstream 28408 21707938 ~ 21712568 (-)
LOC122337558 LOC107552383 coding upstream 33997 21713527 ~ 21734713 (-)
LOC122348885 NA coding upstream 54804 21734334 ~ 21736708 (-)
muc13a NA coding upstream 58492 21738022 ~ 21756866 (-)
G5047 NA non-coding downstream 55506 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 957197 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 973789 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1207072 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1215903 20459541 ~ 20460184 (-)
G5327 NA non-coding upstream 364372 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 668984 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 732932 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 755083 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 765428 22444958 ~ 22446648 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 112010 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 265516 20906170 ~ 21410571 (-)
G4958 NA other downstream 989347 20683842 ~ 20686740 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 1306976 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 1363139 20289317 ~ 20312948 (-)
G5104 NA other upstream 38609 21718139 ~ 21766284 (-)
G5108 NA other upstream 44857 21724387 ~ 21772762 (-)
LOC122348907 NA other upstream 82351 21761881 ~ 21799744 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 579909 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 593288 22272818 ~ 22287521 (-)

Expression


Co-expression Network