LOC122342190 (LOC107689477,LOC797212,LOC107682957)


Basic Information

Item Value
gene id LOC122342190
gene name LOC107689477,LOC797212,LOC107682957
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21539766 ~ 21548066 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236036.1
aatcttaaatacaattttcaaccttttttcaaacattttatttgctgGAAGGTGGGTCTTtaagtgttatattttatacattcttTTAAGCTTTAGTCACAAAACTTTAACCACAGAATTATTTACAACATAATTTAACACGCTTCTGtttcttaaaggggtcattggATTCCCATTTTCCACAAGTTGATATGACCCCTTTAGGGTCTTAAGAAAAGTCTGTAACATAATTTGGTTAAACAATTCTCAATAGTAGTGTGAAATAACACCCTTTTTACCCAGCCAAAATTAGATATGTATTCAACACTTTGTGCTTTTTcaagttgctttaaatgctaacgAGCTCTCCTGGCCCCGCCCCTCTCCTCGTCGAGTGACAAGCATACTGTAAACTTTAGCCATGAAACTTGCTAACTAGCACATTAAGAAAGGTAATTTGCAAAGATTCATGACAAACCCTTATACTCACTTCTGTACACGAGAGTAAACCCAATGGCTGACTGATGACAGCTCACTCAGCACGGTCTGTAACTGctgtcattttgttgtttatatcatttatgcaattatatttGGTCACTTTCATAATTTAGAATTCTTTGTTCATTATGTGTACTTTTATGTTCTATTTTGTTTATCGTATGctgagacttttattttgacatctcGTTTCTGGCGCATTTGCTCAAATGCTCACGCAGGTGCGAGGTTTTTCCTTCCACTAGCTAGAGGCAAGCTAAAAGTTTGCTAAAAGTTTGCTCTCGTCAAAAAGGACTTGAACAATTACAAAGAAGATTTAAAGACTGTTTATCTTCATCATAGCATGCAGCCAACGAGGATTCAATGTGACACATCCCTGCCTGTTGGTCTCAGCCTGCTTTTTCAATAGCGCAGATGCTCTGTGCCTCTCCTGACAAACACTCACATTACATATGAATGACTGGGCTGGAGACACCGCTGGCCAAGGAGTTGAACAGCATGGAAAACTCCTCGGAATGGAGCAACTTTTCACTCGACTCTGATTTGGAGCCCTGTGCTACGTTGAGGAGCTCCGGCTCGCGAGTCGCCCTCTATGTCTTCATCATCTCTGGGATCGTCTGCACCGTTGTCGGCAACTTCCTGGTGGTGCTCGCCATCGCTTACTTCAAACAGTTGCAGTGTCCTACTAACTCTTTCGTCATGTCTCTGGCTGTTGCTGACTTCCTGGTGGGTCTAGTTGTTATGCCGTACAGTATGGTCAGAACAGTTGAGGGTTGTTGGTACTTCGGCCCAACCTTCTGCCATCTTCACTCCAGCTTGGACGTTATGCTCTGCACGGCCTCCATCTTCCATTTGAGCTGCATCGCTTTTGACCGCTATTACGCCGTCTGCAACCCCTTGGTGTATTCGTTTAAGATGTCCCATAAGCGTGTGGGTCTCCTGATTGTGGTTTGCTGGGCCATTCCTTTCCTCATCTCCTTCTGCCCAATCCTTCTCGGGCTGCACAAGCTAGGTATGGACATTCCTTTGCCTGAAAACGTGTGCATCTTCTTAGTGAACCGCGTTTATGCCGTTATGGCGTCTCTTGTAGCGTTTTATCTGCCTATGGTGACCATGTTGGTGGCCTACTGGAAAATCTACAAAGCTGCAAAGCGGCAAGCCATGCAGATAAGCGCGATGGAGGCGCAGATGGCGGCAGGTGTGGGCAAGGACTCAagcaagaaacaaaaacatcgCAACTCAATAAGGAGGGAAAGAAAAGCAGCCAAAACTCTGGGTATTATCATGGGCGTTTTCCTTCTTTTCTGGTTGCCGTTCTTTACTGTTAATATCGTCGACCCGTTTATTGAGTACGGGACTGCTGCTGTTATATGGGATGTGTTCCTGTGGTTGGGGTATGTCAACTCCTCCCTAAACCCTTTCCTCTATGGCTTCTTTAACAGGTCCTTCCGTAGGGCTTTCCTCATGATAATGGGCTGCAGAATATGTCTGCCTGGCACAGCTCAAGGAATGGACCTCTCTCACTCGAAAAGAGATGTCACTGACAACCAGTAGACTGTAGTGGAAGTTGTCatctgttttaatgaaatgttccTGTCCAGCCCATATGgcaaactatatataaaatattgttcaaaTATAGACTTTACCACATATGCCTTATTCCAATGTTACAGTAGAACAGGAGCAGTTACATATAACTTATATACTTTGCTTTATATACTTAAATCCAAGAAAATGCATTCACatgttacatttaaagaaaaacaaatgcgttctgtgtatatttattatgtataaagacacatacatgc
>XM_043236072.1
cttaGCATTTTTTAAGCCACTCAGAAATcaattttaatgtgtgttttcatcACTATTAAATAACCCAATAGATCGAGGCAAAAATCTGCCAAGATTTCTGTGGAGTCGTGTGGGCACAGATTCGCTGTGTGCCTGGCCAAAGTCTAGCTCATTCTGAGATCGGAACAGAATGCAGTGTGTTTACTGATGTTATCTGTGAAATCCAGACTGTCAATATAGCAGTATCTTTCTACTGCCCGCTTCGGGAAAGCAATTATTTCATCTGATTCACACATTAAGCACAATTTAGAAAACATGTAACCTCTCTGTTATTACCCAGTCTAGCTGACTTTGATGTTTGCATTAGCCttactgaaaaacaacaaacagtgCAGGAAATCTGTTGGATGTGAGGATCATTTGCATAACAATGCCCAACTCTTAATACCCACCATGCAggcacccacacacacacacgccccaCCTACATTCTGATCAAGAGGACTGTTTTAGAGCTTATTAACTTGGCATATTCAAAATATCGCACGCACGGGCACTTTAACATCCTCACCCCACTGATGGAGCTGCCATTTAGTAGAAATGGAGGAGACAAGGTGAATCGGTTAAACATGGCGAAGTAAAGAAAGACGAAACCCGGTTCTTTAGGTTGAACAGCATGGAAAACTCCTCGGAATGGAGCAACTTTTCACTCGACTCTGATTTGGAGCCCTGTGCTACGTTGAGGAGCTCCGGCTCGCGAGTCGCCCTCTATGTCTTCATCATCTCTGGGATCGTCTGCACCGTTGTCGGCAACTTCCTGGTGGTGCTCGCCATCGCTTACTTCAAACAGTTGCAGTGTCCTACTAACTCTTTCGTCATGTCTCTGGCTGTTGCTGACTTCCTGGTGGGTCTAGTTGTTATGCCGTACAGTATGGTCAGAACAGTTGAGGGTTGTTGGTACTTCGGCCCAACCTTCTGCCATCTTCACTCCAGCTTGGACGTTATGCTCTGCACGGCCTCCATCTTCCATTTGAGCTGCATCGCTTTTGACCGCTATTACGCCGTCTGCAACCCCTTGGTGTATTCGTTTAAGATGTCCCATAAGCGTGTGGGTCTCCTGATTGTGGTTTGCTGGGCCATTCCTTTCCTCATCTCCTTCTGCCCAATCCTTCTCGGGCTGCACAAGCTAGGTATGGACATTCCTTTGCCTGAAAACGTGTGCATCTTCTTAGTGAACCGCGTTTATGCCGTTATGGCGTCTCTTGTAGCGTTTTATCTGCCTATGGTGACCATGTTGGTGGCCTACTGGAAAATCTACAAAGCTGCAAAGCGGCAAGCCATGCAGATAAGCGCGATGGAGGCGCAGATGGCGGCAGGTGTGGGCAAGGACTCAagcaagaaacaaaaacatcgCAACTCAATAAGGAGGGAAAGAAAAGCAGCCAAAACTCTGGGTATTATCATGGGCGTTTTCCTTCTTTTCTGGTTGCCGTTCTTTACTGTTAATATCGTCGACCCGTTTATTGAGTACGGGACTGCTGCTGTTATATGGGATGTGTTCCTGTGGTTGGGGTATGTCAACTCCTCCCTAAACCCTTTCCTCTATGGCTTCTTTAACAGGTCCTTCCGTAGGGCTTTCCTCATGATAATGGGCTGCAGAATATGTCTGCCTGGCACAGCTCAAGGAATGGACCTCTCTCACTCGAAAAGAGATGTCACTGACAACCAGTAGACTGTAGTGGAAGTTGTCatctgttttaatgaaatgttccTGTCCAGCCCATATGgcaaactatatataaaatattgttcaaaTATAGACTTTACCACATATGCCTTATTCCAATGTTACAGTAGAACAGGAGCAGTTACATATAACTTATATACTTTGCTTTATATACTTAAATCCAAGAAAATGCATTCACatgttacatttaaagaaaaacaaatgcgttctgtgtatatttattatgtataaagacacatacatgc
>XM_043236119.1
cttaGCATTTTTTAAGCCACTCAGAAATcaattttaatgtgtgttttcatcACTATTAAATAACCCAATAGATCGAGGCAAAAATCTGCCAAGATTTCTGTGGAGTCGTGTGGGCACAGATTCGCTGTGTGCCTGGCCAAAGTCTAGCTCATTCTGAGATCGGAACAGAATGCAGTGTGTTTACTGATGTTATCTGTGAAATCCAGACTGTCAATATAGCAGTATCTTTCTACTGCCCGCTTCGGGAAAGCAATTATTTCATCTGATTCACACATTAAGCACAATTTAGAAAACATGTAACCTCTCTGTTATTACCCAGTCTAGCTGACTTTGATGTTTGCATTAGCCttactgaaaaacaacaaacagtgCAGGAAATCTGTTGGATGTGAGGATCATTTGCATAACAATGCCCAACTCTTAATACCCACCATGCAggcacccacacacacacacgccccaCCTACATTCTGATCAAGAGGACTGTTTTAGAGCTTATTAACTTGGCATATTCAAAATATCGCACGCACGGGCACTTTAACATCCTCACCCCACTGATGGAGCTGCCATTTAGTAGAAATGGAGGAGACAAGGTGAATCGGTTAAACATGGCGAAGTAAAGAAAGACGAAACCCGGTTCTTTAGGTGAGTAGATCTCTAATAtgacataacattttttattgtgattataCCAAGCTTAAATATACCTTAAAGGTCATGAACGTGCAATagtaacactaataataattaatacttgtattttaataaatctataattattatattttatttagtattgtGTTTTTACctttcaaatgtatatttttaaagtatatttttagtcTTTAAGCATTCATATCTGCTATGTCTAGATCAACTCCAgcattgttatttatttctttatttttttacgttatCGTGAACGCCGAATGTGAAGTGTTTCCCTTTTGTGACTGACAGGTCTGTTCGTCTCCTCGTTAGTGTGGGAAGGTTGAACAGCATGGAAAACTCCTCGGAATGGAGCAACTTTTCACTCGACTCTGATTTGGAGCCCTGTGCTACGTTGAGGAGCTCCGGCTCGCGAGTCGCCCTCTATGTCTTCATCATCTCTGGGATCGTCTGCACCGTTGTCGGCAACTTCCTGGTGGTGCTCGCCATCGCTTACTTCAAACAGTTGCAGTGTCCTACTAACTCTTTCGTCATGTCTCTGGCTGTTGCTGACTTCCTGGTGGGTCTAGTTGTTATGCCGTACAGTATGGTCAGAACAGTTGAGGGTTGTTGGTACTTCGGCCCAACCTTCTGCCATCTTCACTCCAGCTTGGACGTTATGCTCTGCACGGCCTCCATCTTCCATTTGAGCTGCATCGCTTTTGACCGCTATTACGCCGTCTGCAACCCCTTGGTGTATTCGTTTAAGATGTCCCATAAGCGTGTGGGTCTCCTGATTGTGGTTTGCTGGGCCATTCCTTTCCTCATCTCCTTCTGCCCAATCCTTCTCGGGCTGCACAAGCTAGGTATGGACATTCCTTTGCCTGAAAACGTGTGCATCTTCTTAGTGAACCGCGTTTATGCCGTTATGGCGTCTCTTGTAGCGTTTTATCTGCCTATGGTGACCATGTTGGTGGCCTACTGGAAAATCTACAAAGCTGCAAAGCGGCAAGCCATGCAGATAAGCGCGATGGAGGCGCAGATGGCGGCAGGTGTGGGCAAGGACTCAagcaagaaacaaaaacatcgCAACTCAATAAGGAGGGAAAGAAAAGCAGCCAAAACTCTGGGTATTATCATGGGCGTTTTCCTTCTTTTCTGGTTGCCGTTCTTTACTGTTAATATCGTCGACCCGTTTATTGAGTACGGGACTGCTGCTGTTATATGGGATGTGTTCCTGTGGTTGGGGTATGTCAACTCCTCCCTAAACCCTTTCCTCTATGGCTTCTTTAACAGGTCCTTCCGTAGGGCTTTCCTCATGATAATGGGCTGCAGAATATGTCTGCCTGGCACAGCTCAAGGAATGGACCTCTCTCACTCGAAAAGAGATGTCACTGACAACCAGTAGACTGTAGTGGAAGTTGTCatctgttttaatgaaatgttccTGTCCAGCCCATATGgcaaactatatataaaatattgttcaaaTATAGACTTTACCACATATGCCTTATTCCAATGTTACAGTAGAACAGGAGCAGTTACATATAACTTATATACTTTGCTTTATATACTTAAATCCAAGAAAATGCATTCACatgttacatttaaagaaaaacaaatgcgttctgtgtatatttattatgtataaagacacatacatgc

Function

NR:

description
PREDICTED: 5-hydroxytryptamine receptor 4-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001594 trace-amine receptor activity molecular_function

KEGG:

id description
K22790 Octbeta; octopamine receptor beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236036.1 False 2294 mRNA 0.42 3 21539766 21548066
XM_043236072.1 False 1971 mRNA 0.44 2 21539766 21544863
XM_043236119.1 True 2316 mRNA 0.42 2 21539766 21544863

Neighbor

gene id symbol gene type direction distance location
LOC122348874 LOC107552383 coding downstream 123922 21411863 ~ 21415844 (-)
LOC122349971 lrrtm2,LOC107680618,LOC107750357 coding downstream 154842 21381701 ~ 21384924 (-)
cisd2 cisd2,LOC107552739,LOC107746991,LOC107556804 coding downstream 843999 20693265 ~ 20695767 (-)
LOC122344926 LOC107730532,LOC107664579,LOC107674210,LOC107746658,LOC107556811 coding downstream 1089647 20445132 ~ 20450119 (-)
LOC122345104 LOC107552254,LOC107664557,LOC107730505 coding downstream 1105395 20430808 ~ 20434371 (-)
smox smox,LOC107689473,LOC107551688,LOC107551695,LOC107692173 coding upstream 20036 21568102 ~ 21577369 (-)
fbxo41 fbxo41,LOC107689471,LOC107692170,LOC108260496 coding upstream 74299 21622365 ~ 21663567 (-)
LOC122342104 LOC107689469,LOC107551743,LOC107719777,LOC797711,LOC107711522,LOC107567046,LOC107692200 coding upstream 128021 21676087 ~ 21679530 (-)
mogs mogs,LOC107719770,LOC107689467,LOC107551727,LOC107567052,LOC107692169 coding upstream 139161 21687227 ~ 21691373 (-)
si:dkey-56e3.3 LOC107719778,LOC107689468,LOC107552374 coding upstream 159872 21707938 ~ 21712568 (-)
LOC122349798 NA non-coding downstream 820876 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 837468 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1070751 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1079582 20459541 ~ 20460184 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding downstream 1094972 20442952 ~ 20444794 (-)
G5047 NA non-coding upstream 64852 21612918 ~ 21620581 (-)
G5327 NA non-coding upstream 495836 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 800448 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 864396 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 886547 22434613 ~ 22438354 (-)
ctnna2 ctnna2,LOC107689479 other downstream 129195 20906170 ~ 21410571 (-)
G4958 NA other downstream 853026 20683842 ~ 20686740 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 1170655 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 1226818 20289317 ~ 20312948 (-)
si:dkey-9i23.16 NA other downstream 1399187 20137035 ~ 20140579 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1551 21549617 ~ 21564077 (-)
G5104 NA other upstream 170073 21718139 ~ 21766284 (-)
G5108 NA other upstream 176321 21724387 ~ 21772762 (-)
LOC122348907 NA other upstream 213815 21761881 ~ 21799744 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 711373 22259439 ~ 22328929 (-)

Expression


Co-expression Network