mtus1b (mtus1b,LOC107747391,LOC107656488,LOC107562915,LOC107721423,LOC107702266)


Basic Information

Item Value
gene id mtus1b
gene name mtus1b,LOC107747391,LOC107656488,LOC107562915,LOC107721423,LOC107702266
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 9827103 ~ 9863686 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236706.1
TCTCTGAGTCTCCGCTCTGACTGAAACTGCTCTCTTGCAGTGCTTTTGCTGGCAGGATCGAATGAAACAGGACATTCTGTCCGGGACAGACTTACCTGTggaaaaatgtctgttttgatGAAATGAAATACGCTCTAGGATTGATTCAAAACACTTGAAAAGCAGAGTCATTAAAAGGGTGTCAGCAAAACCACGGACGTCATCTTCTGAATGATCAAAGGAACACACTTTCTATGATGAGAAACACATTAATCCCTTCTTCTACAAAGTAGAGTATTTCCTGTCCATCAGTGCTGGATTGGATCTAACTATGGGGGATGTGACTGTATGATTGTGTCTCCATCCACATGTGTCATGGAGTCACCAACAAACAAATCTGAGCTTCCGTCACCTGCACTTCCCAAGAGGCCTTCTCAGGGATCTCAGCATGGGATGTGTCTGGCATTACAGAGTAGTGAGCAGAGTAGCAATGCTTTCACCTCTGAGTCTCCATTGTCATCGTCGACCTTGCTCTTGTACGATAGAGGTGAGACTTCACCGGACTCTGTGCGTAGCTTAAGTAGTCTGAGCAGTGCTAGAACAGATAGTCCTCTGGATGTTGACATGCCAGAGGTGGAGATGGGAAAAGCAACGGCCAGCAGTGATGATTCTGGCATACAGAGCCCAGACTGCAGACCAGACTACAGTGAGGACAACGACAACTCTGTGTCTGTTTATCTGGATGCTAATGAAGACTGTTGGAGCGACAATGACAACAATAACGTCACCTTGGTGGTAACACAGAAGGTTGGTCAAGCTGATGGTGATGATACATCCTTGTGCTCTTCAGAAAACGGTGACGATGATAATGACACtaaagaggaggatgaagaagactcttttctttctttagccTCGGTAGAATTAATAATGAAGAGCCAAGTTGGTGTCTCTGATCTGGAAGTCTCTACCAGCTCTGAAGAGGTAATGCCAAACAGTGTTTCATCAGAAGGCCAGCAAGCAGAAGTGCTTGACATTGCAGTTGTGAATGAACGCCAAAGGGAAGATGTCTATAAAACAGAGGAAGTTGAGTTGTCTTCGGTTGTTCAAGAAACTGATGTCATGAATGAAACAGTCGTGTCTCTTGAAAATACTCCTATAGCAGATACCAGAAACACAACTTCTCGCTCATTCATCTCAAAAGCAGACAACCAGCCAAAGTCCACAGGAAAAAAGACCAATGATTTGGAAGGATGTGTTTATGCCAAGCCTCCTACAAGGGCCGCACTCACCAAAGCCACAAAAGCTGATGCGAAGAGGTTCCCCAGGCCAGACCTGAGGAACGTGAAGGCCAAGATCATCTGCAGGGCTGCCTCTGCGCCAAGATCAGCCAAtcctgtaaaaacaaacactaatgTTAACCAGTCCACTTCAGGAAGTGTGAAGGTTCATGCTAGTAGGAAGGGGGAAAATAAATCTGTTGGAAAAAGAAGTAGATCGTCATCAAACCATACAAGAGGCAAAGAAACAAAGATGGTGGTCGGTGGTGGTCAAGAGAAAGATGTAAACATTTCATCCTTGTCTACACGAGGAGAAGAAGCGATGAAGTCAGAAACTCCTGCTTCAGTTGATTTTAAAGATGAAGAAGAGCCTCAACTTGAGAAAGAAGCAGGGGAAGAAACCTCTAAGAGCACCAGCAAGACCGTGTCTTCCAAGTTGGGACCATCTCTGGGGCCTAACAGTACCTCCACCTCTGGACTCCCAGAAACCAGACTGAAGCACCGTGAAGCCCGACCTACAGGTAGTCTGGGTCCACCGGGAGGCAGAGTGGTTCAGCCGGCTGGTATTCCAAGGATGCGAAGCACAGACAAATGCAGTCCCACTTCTGTTTCCAGTCCTTTTTGTAAAGGTCTTCAGAAAGCTGCCTCTTCCAAACTGCCTGTCAAAGGCCTACCCACAAGCCCCAGCTCCTCATCACTGGGAAGTACAATCAGCGAAAGCAACAATATTGCTGTAAGCAAAGGTCCTGCTGAGGGGACAAAGAGTGAGGAGAAGTCTATCAAACAATCACTAACATCCCAGGTTCAAGGAAAGTGTCTAGTTAGCAAACCTGTATCAGGTCACCGCGGCAGAGCGAGCTCCACACCGTCTAAACCAGCACCAGGAACGCTGAAGGTCATGTTATGGTCTCCGAGACTTTCCCTATCAAACTTCCACGTGAAGCTCACGGCTAAAGGACTATTCCGCAATCTCCAGCTACTGCCAGGATGCAAGAAGACTACGGTGGTCTTCCATGCAGTGGACAAGAGCTCTAAAGGGCCCAAAGCTGCAGGGGCAACAGCTGGACGGACACAGCAGCACAGCTCAGCTAGTCAAGGAGGACCGacggaggaagaggaagagaaagatcTTCGTCTTCAAAATGAGAAGAAAAGTCAATGCATCCTGCATCTCCGTAAACTCATTGTTAACGGCAATCGGCGCCTGGAGGCTCTCGCCCTGGTTGTGCAGCATATCTTCAGTGAGCGTGAGGTGGCAGTCAAACAGAGGGAAGAACTTTCTGTCCAAATCAACAACCTGCGAGAGCAACTGGGTAACTCTGTCTCGTGTTGTGAGCAgctggagaaagagaaggaggagGTGCGTGTAACTTTGGAGGCATTGTTTCAGAAACTACAGGAGCAGCATCAGACAGAActccagcagctggaagagcGACTGAAGGACTTCTACTCTGCAGAATGGGACAAGACTCACGAGGCCTATCAGAGGGAGGCGGATAGATGCAGGGTGCTCATGCAGCAGCAGGTGGAGGATGTGAGGAGTAAACAAGAAGCTCTGAGGAACCAACAGGAAGTGGCACACACCCAGCAGATAGCAACACTGAAACAGGAACATGAGACTTCACTTACAGAGCTCAGGGAGACCCATGAACGGGACACGCAAGAGCTTGATAAAACAATCAAGGAGTCTGAAGCCATGCTCAATGAGAAAATTCTGACTTTGACAGCAGAAAACGAGGCTTTgaaagagagactgagagaagaggaggaacGGAGGAGAGCTCTGGCAGACAAAAGTCAGAAGGACGCCCACACACTGTATTTGGAACAGGAGCTGGAGAGCCTCAGAGCCGTGCTGGAAATAAAGACCAACCAGATACACCAGCAAGACAAGAAGCTCATGCAGATGGACAAACTGATTGACGATAATTTGAAACTGGAAGAGTGTTTAAAGAAGGTCCAGCAGGAGAACGAGGACTACAAGGCTAGGATGGACAAACATGCTGCGCTTTCAAAGCAGCTCTCCTCAGAGCAGGCCATGCTTCAACAGACCCTACAGAAAGAGTCAAAGGTCAACAAACGGCTGTCTATGGAGAACGAGGAGCTGCTGTGGAAACTACACAACGGGGACCTTTGCAGCCCTCGACGCCTCTCGCCCTCCTCTCCCTTCCACTCGCCCCGAAACTCTGCCTCCTTCTCCACAACCCCGATATCACCCAGATAACCTCTGAGCTCTGACCTCGCTCGCTCGGAGGCACCTATATGGACCTTTCGGCCATTTTATTCCTATAATAGGACTTGTACAGTTTGTAGAGACTTGTAAAGTTTATAAATGTTCCCTTTCCAGTTAAAGACAATGATGCACAGTTGCACTTCTAGATCAAGGAATTGCCTTGTTCAGTTACACTCTCGTTTGTTCTTCGTCTCTCACCCTTCACCCTTTTTCACAAACGTACACAAAAACTTCTCTGAGGAGGGAACGTACCTCAGGGCTTGTACATAGAGTATCTCTTCCTCGGACTGCCATTTTCTGTTACTTGTGctcttttatcctttttttttaaattaaaatggtttGTGCATAGTACGTCGAGATGTAAAACTGtcgttttttttgtatgctgACAAGAACACTATATGATATTTGCAAAAAGGATGGAAAACAGAAGTCGTCTATTTGCTCGGATTGATATTTTTACAGCATGAAtatagaaaagagaaaaagaaaggcaTTTCAAGGAAGAAGCTGAAATGTCAAGCACACCTCTGAACTGGAGTGCATACACTGTAGATCCAGATCTCTGTTCCTAATATTGTGGAATGTATTTACTTCTCTCCCAAACTGTGTCCAGTGGCCCACACATCCAGAACGCTTTAGGTGTGAATGTGTCCCTATCTCAACCACAGTGCCCTTCTTCgctttatgttatttttattttttttaacgaaTGCATTAAATTTTCTGGATGTTTatctatta

Function

symbol description
mtus1b Predicted to be located in nucleus. Orthologous to human MTUS1 (microtubule associated scaffold protein 1).

NR:

description
PREDICTED: microtubule-associated tumor suppressor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236706.1 True 4242 mRNA 0.47 15 9827103 9863686

Neighbor

gene id symbol gene type direction distance location
vps37a vps37a,LOC107656515,LOC107702331,LOC107747393,LOC107721427 coding upstream 21620 9799826 ~ 9805483 (+)
LOC122353686 NA coding upstream 29455 9797430 ~ 9797648 (+)
LOC122353681 NA coding upstream 30674 9796214 ~ 9796429 (+)
LOC122353673 NA coding upstream 31689 9795199 ~ 9795414 (+)
micu3a LOC107747394,LOC107656542,LOC107562929,LOC107721426 coding upstream 32907 9771041 ~ 9794196 (+)
pcm1 pcm1,LOC107747390,LOC107721421,LOC107554391,LOC107702267 coding downstream 2478 9866164 ~ 9888659 (+)
casp3a casp3,LOC107754122,LOC107656460,LOC107562747,LOC107746030,LOC107702336 coding downstream 472999 10336685 ~ 10341208 (+)
helt helt,LOC107562737,LOC107656987,LOC107754167 coding downstream 502027 10365713 ~ 10367288 (+)
slc25a4 slc25a4,LOC107656452,LOC107562743 coding downstream 535650 10399336 ~ 10401667 (+)
ankrd37 ankrd37,LOC107754130,LOC107656428,LOC107746026,LOC107702343 coding downstream 546158 10409844 ~ 10412143 (+)
G2149 NA non-coding upstream 39942 9784218 ~ 9787161 (+)
LOC122353659 NA non-coding upstream 764494 9061961 ~ 9062609 (+)
LOC122352814 NA non-coding upstream 773630 9051908 ~ 9053473 (+)
LOC122352408 NA non-coding upstream 795280 9030823 ~ 9031823 (+)
G1979 NA non-coding upstream 1084582 8740832 ~ 8742521 (+)
G2219 NA non-coding downstream 215199 10078885 ~ 10079470 (+)
G2246 LOC107754123,LOC107562734,LOC107746042,LOC107702337,LOC107558191 non-coding downstream 509276 10372962 ~ 10373847 (+)
G2350 klhl2,LOC107591556,LOC107745059,LOC107702385,LOC107655955,LOC107750425,LOC107548347 non-coding downstream 963999 10827685 ~ 10837245 (+)
G2352 NA non-coding downstream 973939 10837625 ~ 10838465 (+)
G2354 NA non-coding downstream 1084433 10948119 ~ 10982967 (+)
G2125 NA other upstream 414666 9408405 ~ 9412437 (+)
G2063 NA other upstream 791503 9035086 ~ 9035600 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other upstream 1046939 8762139 ~ 8780164 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other upstream 1121230 8700440 ~ 8705873 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other upstream 1192704 8623158 ~ 8634399 (+)
G2230 NA other downstream 381471 10245157 ~ 10245578 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other downstream 392976 10256662 ~ 10335202 (+)
G2253 NA other downstream 533687 10397373 ~ 10398040 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other downstream 619954 10483640 ~ 10490084 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other downstream 981270 10844956 ~ 10981356 (+)

Expression


Co-expression Network