LOC122342838


Basic Information

Item Value
gene id LOC122342838
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12429730 ~ 12434898 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236977.1
ATGAGCTGCAGCCGCATGTTCATGCAGGACAGAGGATGTAATGACGGTTTGGGATTGCTGAGCGTTGGCGGCATCTCCTCTTGTGAAAGCCAAATCGTCCGCAGTCCTCCGATGTCCAGCGCATCCCTCCATACATCCTGCAATTCTCTAGAAGCAGCAGGGCCTTCAGAAAGCATGGATTTCTGTAGTGACCACGAAGTGTCTTCTATCGAGTCTACATCTCTAGGAGTGTCACCTGCAGACTCTGTGGACAGCAGTACAGAAAACCATGTCAGTCTaaggaagaaagtgaagaacaggatCTGCTCACTCTTCAAGAGGACATGGAATGCTATAAAGCGTCCTTCGTTCAGTTgtgaaacactgacagagcCGTTCACGCCTCCGTCTAATGACACAGATCTAGACGGTGCAGATTCATCACGTCTTGCGGATCCTAGGCTGGCTGAATGGAGCTTTGACAGTGCCAACAACCCCTTTGAAGGAGGACGTGACAATAGCCTGGAACTGTTAAGCATTAGCAGTGACATATCCTCCACTGAGGAACGAAGTTGGTCTCGGCAGAGTGGCCCTGCTAGAGAAGAGTGCGCATGTTCTGATCGTGAGAACACGTACGCAACAGAGTCTTCCCTGAGCCTGAAGGAGCCGAGTGACGAAGTGGCGCCTTCTGTGGAGAACAGCACAGaaaaacaccgcggtttgaggaaaaggatgaagaaagggatttcttcagtctttaagAAAGCATGGAAGCCCTTAAAGTGGCCCTCCTTCTGCTGCTGCCGCGGGACCAGAGTTGAGCCATTTGTGCCTCTACAAGAGAACTCGGGCCGAATCCAGAGCCAGCTGATCCCAAACCACACTTTGTTGCAGAGCCCTTTGGTtttcaatgatttattgaaatctgcagatggaggaggatGGCCTGGCGTTGTCGCAGCGGCCGAAGAGCTCTCGCTGGAGGAGGGCGAGCTGGGCCCAGCGGCCTTGGAGGTGGTGGTGCCCGCCGTTTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236977.1 True 1017 mRNA 0.52 4 12429730 12434898

Neighbor

gene id symbol gene type direction distance location
ncapd3 ncapd3,LOC107655906,LOC107709432,LOC107750432,LOC107702392 coding downstream 10450 12407369 ~ 12419280 (-)
wdr19 wdr19,LOC107591558,LOC107750430 coding downstream 23175 12390944 ~ 12406555 (-)
glrba glrba,LOC107702391,LOC107591559,LOC108443987,LOC107655919,LOC107548353 coding downstream 40013 12368875 ~ 12389717 (-)
tmem144a tmem144a,LOC107656881,LOC107548314,LOC107745069,LOC108443989 coding downstream 112539 12312334 ~ 12317191 (-)
npy1r npy1r,LOC107591578,LOC107548312,LOC107656908,LOC107702283 coding downstream 121021 12292229 ~ 12308709 (-)
LOC122342847 NA coding upstream 2924 12437822 ~ 12440445 (-)
adamtsl7 LOC107709448,LOC107750434,LOC107702297,LOC107570220 coding upstream 42620 12477518 ~ 12494325 (-)
zcchc7 LOC107709449,LOC107655886,LOC107548354 coding upstream 64873 12499771 ~ 12544141 (-)
melk melk,LOC107709443,LOC107702285,LOC107570222 coding upstream 172868 12607766 ~ 12617282 (-)
LOC122348170 frmpd1,LOC107709451,LOC107655878,LOC107548301,LOC107750435,LOC107702397,LOC107570223 coding upstream 183585 12618483 ~ 12643576 (-)
G2829 NA non-coding downstream 92971 12335352 ~ 12336759 (-)
G2826 NA non-coding downstream 139624 12289829 ~ 12290106 (-)
G2750 NA non-coding downstream 279014 12142906 ~ 12150716 (-)
G2742 prss12,LOC107551563,LOC107754187,LOC107656290,LOC107702379,LOC107591549,LOC107750419 non-coding downstream 500734 11927551 ~ 11928996 (-)
G2690 NA non-coding downstream 519720 11849622 ~ 11910010 (-)
G2839 NA non-coding upstream 1019 12435917 ~ 12441497 (-)
G2841 NA non-coding upstream 19333 12454231 ~ 12454769 (-)
G2842 NA non-coding upstream 20456 12455354 ~ 12455572 (-)
G2882 NA non-coding upstream 115024 12549922 ~ 12550239 (-)
G2889 NA non-coding upstream 157543 12592441 ~ 12595294 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 63622 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 312347 12097910 ~ 12117383 (-)
apela NA other downstream 641064 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 849013 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 916897 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 469301 12904199 ~ 12926482 (-)
smim18 NA other upstream 534195 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 719588 13154486 ~ 13159444 (-)
G3072 NA other upstream 856398 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 1394565 13829463 ~ 13842664 (-)

Expression


Co-expression Network