fgfbp2b (LOC107750470,LOC107702288)


Basic Information

Item Value
gene id fgfbp2b
gene name LOC107750470,LOC107702288
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12897567 ~ 12899663 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237010.1
atgttttcgtCCACAAACAGCGCGGACAGCAACTTCCGTTTCGTCTCTATGGTTACAGGCGGCTCCAGACTAGAGTCCAGAGGCCCCCCCAGTCTGGAGGGATGTGTGCACTCTGCCCTGCTCAAAGACCCCTTTGTGGGACTCGTGTTTATAAAGACGGCCTGCACCTCCAACACCTTCCCGAGTCCATTCTACACCTCCATCATGAGAGCCGTATGCAGCGCCGCTTTCCTTCTGGTCTGTTTCGTGTGGGCTACTAACGCTCAGGCCCAGAACAGCAGTAACCAGGGGAACGGGATCAACCACGTCGAAAGACAGCAGCAGCCGCCGAAAAGCAGCATCTGGGATGAACCCATTCGCTTCAACACCAAAGCAAAAGATAGCTGCTCCATGGCGATCTTCGGCCAGACCAACTTCACCAAGCTGCGTGTCTCCTGCAAGAGCAAGGGCAAGTCGTACTGGTGTGACTTCCTAGGCAAACCTAACCTATGCAGGCCATATAGCAGCAACCCTCGGCACTTCTTTACTCAGATCATGTGGGACATGAGGAAGCTTCAAAACGCCTGCCAGGGACCGCGGGTCTACAAGCCGCAGATGTGTCGCTCTGCCTCAGATGAGGTCCAGATGGTGTTCCACGCCTCTTGGCCCAAAATCTCCATCCCAAAGCCTACCCAGGTCAAGTCCAGCATCACCCCTACCAAACCTCCGAGCTCAAAGCAGCAGCCCAAACCTCAGCAACCAGCCAAACCAGCCGCCAGACCAGTCAAGCCTGCCGTTACCAAGACTGTTACACCACGGAAATCTGTAAAGACCATCACAGCGAGACCCACAGCGGCAGACGAGACTCAAGCGACCAAGATGGCGGAGGAATACTGCTGGAAGAGTCTCCAGGGCATCTGCGAATACTTCATTAGCTGGTTCCAAAACTAATTCATCACC

Function

NR:

description
PREDICTED: fibroblast growth factor-binding protein 2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237010.1 True 939 mRNA 0.55 3 12897567 12899663

Neighbor

gene id symbol gene type direction distance location
fgfbp1b LOC107709462,LOC107548318 coding downstream 3320 12892635 ~ 12894247 (-)
uchl1 uchl1,LOC107709457,LOC107548360,LOC107701450,LOC107750438 coding downstream 21169 12873205 ~ 12876398 (-)
chrnb5a chrnb2a,LOC107548317,LOC107656869,LOC107709434,LOC107702400,LOC107562601 coding downstream 42573 12842252 ~ 12854994 (-)
chrna6 chrna6,LOC107709456,LOC107655806,LOC107750436,LOC108260984,LOC108412407 coding downstream 74093 12816755 ~ 12823474 (-)
chrnb3a chrnb3a,LOC107562617,LOC107655822,LOC107548357,LOC107709455,LOC107702298,LOC107750476 coding downstream 103163 12778589 ~ 12794404 (-)
tapt1b tapt1,LOC107750443,LOC107702406,LOC107671913,LOC108434341,LOC105908524 coding upstream 29453 12929116 ~ 12943417 (-)
ldb2b ldb2b,LOC107562611,LOC107750444,LOC107702407,LOC107548319,LOC107671914,LOC107709436,LOC108434309 coding upstream 44446 12944109 ~ 12956262 (-)
qdprb.1 qdprb1,qdpr,LOC107750446,LOC107702409,LOC108437732 coding upstream 63935 12963598 ~ 12966507 (-)
adgrl3.1 adgrl3.1,LOC107709467,LOC107671918,LOC107702411 coding upstream 93581 12993244 ~ 13084503 (-)
rfc1 rfc1,LOC107709439,LOC107700290,LOC107757601 coding upstream 224208 13123871 ~ 13136414 (-)
G3020 NA non-coding downstream 9914 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 279525 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 302273 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 347328 12549922 ~ 12550239 (-)
G2842 NA non-coding downstream 441995 12455354 ~ 12455572 (-)
G3070 NA non-coding upstream 306124 13205787 ~ 13206826 (-)
G3074 NA non-coding upstream 395034 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 403090 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 488771 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 489590 13389253 ~ 13389325 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 531459 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 780184 12097910 ~ 12117383 (-)
apela NA other downstream 1108901 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 1316850 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 1384734 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 4536 12904199 ~ 12926482 (-)
smim18 NA other upstream 69430 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 254823 13154486 ~ 13159444 (-)
G3072 NA other upstream 391633 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 929800 13829463 ~ 13842664 (-)

Expression


Co-expression Network