glb1 (glb1,LOC107746116)


Basic Information

Item Value
gene id glb1
gene name glb1,LOC107746116
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31595831 ~ 31602441 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237501.1
CTCCAGAGAATGATTCGTTCAGTAGTCGTACATCtctagtaaaaaacaaaacaatggcaTTTCACTTCCGGACCGCTCGAACACCATGGCACCCGGTGTCGGACTGATACCGGTCCTCCTCCTGACCCTGCCATTGGTCACGTATGCCACGGCACCCAGTTTCTCTATCGATTACCATCGAAACTCCTTCATTAAAGATGGAGAGCCGTTCCGCTACATCTCCGGCAGCATCCACTACAGCAGGATCCCCAGTGTCTATTGGAAGGACAGGCTGCTCAAGATGTACATGGCCGGTTTGAACGCCATCCAGACATATGTGCCATGGAGCTTCCACGAGACGGTGCCTGGTCGGTACGACTTCAGCGGAGACCGGGATCTGGGGCACTTCCTACAGCTGTGCCGTGAAATCGGTCTGCTGGTCATCATGAGACCGGGCCCCTACATCTGTGCGGAGTGGGATATGGGGGGTTTGCCTTCCTGGCtgttgaaaaagaaagatattcTGCTGCGATCATCTGATCCAGACTATCTCGCAGCAGTGGATAAGTGGATGGGGCAGCTGTTGCCCATCTTGAAGCGTAACCTTTACCAGAACGGAGGACCCATCATTACAGTGCAAGTAGAGAATGAATACGGTAGTTACTTTGCCTGTGACTTTAATTACATCCGGCATCTCAGCCTGCTGTTTCGGGCTCATCTGGGAGATGATGTGGTCCTGTTCACCACAGATGGACCGACTGTGGGTTATCTCAAGTGTGGATCTCTCCAGGGCATCTATGCCACCGTTGACTTTGGTCCAGGGTCAAATGTAACCGCTGCGTTTGAAGCACAGAGACACGCAGAGCCACGTGGGCCTTTGGTCAACTCTGAGTTCTACACAGGCTGGTTGGATCACTGGGGCGAGAAACACTCGGTGGTTTCCACAGCTGCTGTGGTCAAGACCCTCAATGAAATTCTGGCAGTGGGAGCCAGCGTCAACTTATATATGTTCATCGGTGGAACTACCTTTGGTTATTGGAATGGCGCCAACACTCCTTATAGTCCTCAGCCGACCAGCTATGACTTTGACGCCCCGCTTACAGAAGCTGGAGACCTCACAGAAAAGTATTTCGCTATAAGAGAAGTCATCAAAATGtacaaagAGATACCAGGGGGACTGCTGCCTCCATCAACACCTAAATTTGCTTATGGGCAAGTGCAGATGAAGAAGCTCAAGACCGTGTCAGAGCTTTTAGATATATTATCTCTCTCCGGCCCCGTCAAAACTCTTTACCCAATAACGTTTACTGATATGAACCAGGCGTTTGGCTTCATGCTGTATCAGACTGTTTTACCTGTCAACTGCTTGAAACCCACGCCGCTGTCGTCCCCGCTAAACGGAGTCCACGATCGGGCCTACATATCGATCGATGGGatTGCTGCTGGTATTTTGGAGAGGAACAAGGCACTCACCATTAATATAACAGGGAAAGCCGGCAGCCACGTGGACGTCCTGGTGGAGAACATGGGGACAATCAACTATGGCAAAGAAATTAATGACTTCAAGGGCCTGGTGTTTAATCTGACTCTGGGTGCTGATGTTCTGGGTAACTGGACGGTGTACTCTCTGAGTATAGATGAAGCAGTGCGCAAGGGCCTGTTGTCGGCTTCGACCAGATTCGTCTCCACCTCCGCCAGCCCCACTCCTCCTGCCCTTTCACCTCCGACCTTCTACGCCGGCAGCTTCATCATCCCCGACAGCATCCCTGACCTCCCTCAGGACACATACATCCAGTTTCCCAACTGGAGGAAGGGTCAGGTGTGGATTAACGGTTTTAACGTGGGTCGCTACTGGCCGTCCCGGGGGCCACAGATAACCCTCTTTGTCCCAGCACACCTGCTCAGCACCTCGGCCCAAAACAACGTAACCGTTCTGGAGTTGGAGGCGGCCCCTTGCTCCTCGGGGTCCTGCATCGTGGAGTTCACCGACACTCCTGTCATAAACGGCTCCGTGAAGTCAACCGGACACTACAAGGAAATTTCATCGGACGAGACCTTCTGGAGCAGAACCATCTTAGAATAAACCGTTCACATCACACATTTTACTGATTTGAAGGAGTCTAAAGGATGAAGTAGTAAGATATGCCACGCGAGAGTACTGTATTGAAAATATGATAATCACTGTGAATCTACAGTAATGTGTGGCACATGTACAGTAATGTACTGTATAGTGATTCTCAGGTGTCAAAGCTGCTCAGAATGAGCTTTGGTCTTGCACTAGATGCCTTCACGATGATGTTACCATTGATTTTCTACTGCTGATTTTAAGCCGTTGCACTTTTAACTCTCTTAAATAGTACTAGAAATCATGTTTCGTcaagtgctctttttttttttttttttttttgcaaatgagtGACTTTTTGGTTTTTGCACCGCATGTCCTTttgttaatatgaaataatggttaatgtttttgtatctGTCCACTTGCATATCTTTTAATTGTGCAGTTAAAGCCATATGAAATCCAGGAATCGTTTGCAAAATAAACTGCACTGTTTTTTACATTCTTCA

Function

symbol description
glb1 Enables beta-galactosidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be active in vacuole. Human ortholog(s) of this gene implicated in GM1 gangliosidosis (multiple) and mucopolysaccharidosis IV (multiple). Orthologous to human GLB1 (galactosidase beta 1).

NR:

description
beta-galactosidase

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004565 beta-galactosidase activity molecular_function

KEGG:

id description
K12309 GLB1, ELNR1; beta-galactosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237501.1 True 2556 mRNA 0.49 16 31595831 31602441

Neighbor

gene id symbol gene type direction distance location
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding downstream 536 31591137 ~ 31595295 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding downstream 23210 31561981 ~ 31572621 (-)
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding downstream 202745 31384340 ~ 31393086 (-)
LOC122349700 NA coding downstream 217292 31372496 ~ 31378539 (-)
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding downstream 621670 30972789 ~ 30974161 (-)
LOC122327810 LOC107747443 coding upstream 31960 31634401 ~ 31661603 (-)
best2 best2,LOC107676102,LOC107569522,LOC107583204,LOC107694823,LOC100695332 coding upstream 125647 31728088 ~ 31734933 (-)
get3 asna1,LOC107569530,LOC107583208 coding upstream 137344 31739785 ~ 31745699 (-)
rnf11a rnf11a,LOC107757048,LOC107694828,LOC107583209,LOC107747427,LOC103044796,LOC108441179 coding upstream 143521 31745962 ~ 31750050 (-)
G8101 acy3.1,LOC107571911,LOC107746091,LOC107746117,LOC107703856,LOC107757064,LOC107570819,LOC107570825 non-coding downstream 6041 31580738 ~ 31589790 (-)
G8100 acy3.2,LOC107657988,LOC107570825,LOC107703856,LOC107571911 non-coding downstream 15675 31579930 ~ 31580156 (-)
G8093 NA non-coding downstream 47077 31548195 ~ 31548754 (-)
G8074 NA non-coding downstream 99921 31492297 ~ 31495910 (-)
G8084 NA non-coding downstream 115487 31479187 ~ 31480344 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other downstream 41796 31550186 ~ 31554035 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other downstream 58415 31532069 ~ 31537416 (-)
G8009 NA other downstream 638345 30943498 ~ 30957486 (-)
G7868 NA other downstream 965326 30630234 ~ 30630505 (-)
G7816 NA other downstream 1397983 30192201 ~ 30197848 (-)
LOC122349741 NA other upstream 20233 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 24462 31626903 ~ 31630020 (-)

Expression


Co-expression Network