cdc25d (LOC107598551,LOC107700789,LOC107729831)


Basic Information

Item Value
gene id cdc25d
gene name LOC107598551,LOC107700789,LOC107729831
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26722519 ~ 26727432 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043237777.1
ttattcatcatctaatgttaataaatgacactttattgtATAGTGTTACCTAAATAATACACGCAAAACAGAAATGTGGTTATGGAATAGGATAGGATAAGCTATAAATTGTACATaaaccttcaaaataaaaatgttttgcatacaaGCTTTATAATGGAAGCGGATGGGGACTATCCTGGTTACAGGTCTTATAGGTAGTCCATCTGTTCAGCTaaatagttttagtgtttcATGTAAGAAGCCATACAACATGAAAACGTCGTGAGTGTTAACACACGACAAGATTGTCGTTTTCGGGGGcgagctgttcctttaagagctTCAGTCTTTCTGAACGCCGGTCTTCGGGGTGCTCCCGTGCTGGTGGAAGGTTACcgcgacgcgacgcgacgcgacgcgcGGATCACGCGACGCTTGTTGTAGCAACGCGGGTTTCCAAGGGAGGAGATGCGGAGACCCTCGGAGCAGATCTGACTCGACTTGAGCGTGTGCTTAGTGCAAGTCTCTCCATGGCAGAAGAAGATCGTTCCCCGGTCAGCGAGCTCTCCTTCAGCCTGCAGAGCCTCCGGTGTCAGGACAGCCTGTGCCTGAGGAGCTCACCCCCCTGGagaaagcttgttttgatgCCTGAATGCATCAGTCCCCCGCTCAACACCCTCTCcagggagagagagacgccGACAGTCTCTGGAGTAAGAAGGCGACGAGCAAGCAGAAGCCTGTCTCCTGAATCCTATTCAGACACGCCCAGGTGTCTGTGGAGGAACTGTCGTGATTCTGCAACCAATAAGGAGAACGAGCGAGCGATAAAGAGGCTGCGCGTGCGTCTCTCCAGCAGGTTCTCCGACGAAGCAGAACCGGGCCGGGCGGGGAGATGGTGCCGCAGCGACCCGGAGGAGGACGCCGGCGTCCCGCGAGAGACGAGCGCCGTCCACCCAGTGGCCGCCGCGAGGTTCGGTCAGCTGAGGGCGCGGAGGAAAGCCCCGCCCACGCACGTGACCCAGGACGCCGTCGCTGACCTCTCGCTCATTGGAGACTTCAGCAAGCAACACCTGCTTCCTGTCGAGAGCGGCGGTCATCAGGAGCTGCACTGTGTCAGCGCTCACACCGTGGCGTCACTGATCAGGGGTCAGTTTGGTGCTGCGGTCGAGGATTTCCTCATCGTTGACTGCCGTTACCCGTACGAGTACCAAGGAGGACACATCAAGGGAGCCCTGAATCTGTACACCGAGTCTCAGATGCAGCAGGCGGTGCGTCAGGCCTCGGCAGGAGCCCAGCTCTCGCCCGGAAGCGACCCGTCCCCGAGGACGAGGACGAGGGGACGTCCGTCCGACTCACCCCCAGGGGAGGAGGGGTCGTCGCCACGGAAACTGATCATCTTCCACTGCGAGTTCTCCTCGGAAAGAGGCCCACATctGTGTCAGTATCTGAGGAGGCTGGACAGACAGGTCAACGTGTATCCCAGCCTGCACTATCCGGAGCTCTACCTGCTGCTGGGGGGTTACAAACTCTTCCATGCCTCTTACCCGgATCTGTGTGATCCCCGTGGTTACGTGCCCATGCGTCACCGCCAGTACCGGGACCAGCTGCACGGATACCGCAGGACACGGCCGACGCGGCAGAGAAGAcgacggccaatcagagcacaccagAGGACCACACGCTAAATACTACAtgctaaatgtgtgtgtgtgtgtgtatatatatatatatggtatatgtAGTAAACCTAAGTTTATTCAGACACCTTTTGAagctataaaaatgataatacaaTATGAGAAGAACGCGTAGTTAAAGCGTGTCAGGTAATGTTGATAGAAAGGTGTATGTAATGAGTTTGGTTGAATGATCAGCTGATGGGTGCACAACAGATAATAACAGTTGCCAAGCAATGCTTAACTCTGTTCGGTCTGTGGTGTGAAAAGGTCACATCCTCagttaaagaaaaacacttaagCGAAGCACGGTCAGCTCAAAGTGTCTGAATCATTTTTGGTCTCAGTTTTTGTATCAGTTTTACTGGTAGTCCACACTATGAAGAGATTTTGGTTATAATATCACAGTCACAGTTTACTTATTAgtgcaaacatacacaaaatggtgtctgaataaatttgtatgtgtgtgtgtgtgtgtgtgt
>XM_043237783.1
catcatctaatgttaataaatgacactttattgtATAGTGTTACCTAAATAATACACGCAAAACAGAAATGTGGTTATGGAATAGGATAGGATAAGCTATAAATTGTACATaaaccttcaaaataaaaatgttttgcatacaaGCTTTATAATGGAAGCGGATGGGGACTATCCTGGTTACAGGTCTTATAGGTAGTCCATCTGTTCAGCTaaatagttttagtgtttcATGTAAGAAGCCATACAACATGAAAACGTCGTGAGTGTTAACACACGACAAGATTGTCGTTTTCGGGGGcgagctgttcctttaagagctTCAGTCTTTCTGAACGCCGGTCTTCGGGGTGCTCCCGTGCTGGTGGAAGGTTACcgcgacgcgacgcgacgcgacgcgcGGATCACGCGACGCTTGTTGTAGCAACGCGGGTTTCCAAGGGAGGAGATGCGGAGACCCTCGGAGCAGATCTGACTCGACTTGAGCGTGTGCTTAGTGCAAGTCTCTCCATGGCAGAAGAAGATCGTTCCCCGGTCAGCGAGCTCTCCTTCAGCCTGCAGAGCCTCCGGTGTCAGGACAGCCTGTGCCTGAGGAGCTCACCCCCCTGGagaaagcttgttttgatgCCTGAATGCATCAGTCCCCCGCTCAACACCCTCTCcagggagagagagacgccGACAGTCTCTGGAGTAAGAAGGCGACGAGCAAGAAGCCTGTCTCCTGAATCCTATTCAGACACGCCCAGGTGTCTGTGGAGGAACTGTCGTGATTCTGCAACCAATAAGGAGAACGAGCGAGCGATAAAGAGGCTGCGCGTGCGTCTCTCCAGCAGGTTCTCCGACGAAGCAGAACCGGGCCGGGCGGGGAGATGGTGCCGCAGCGACCCGGAGGAGGACGCCGGCGTCCCGCGAGAGACGAGCGCCGTCCACCCAGTGGCCGCCGCGAGGTTCGGTCAGCTGAGGGCGCGGAGGAAAGCCCCGCCCACGCACGTGACCCAGGACGCCGTCGCTGACCTCTCGCTCATTGGAGACTTCAGCAAGCAACACCTGCTTCCTGTCGAGAGCGGCGGTCATCAGGAGCTGCACTGTGTCAGCGCTCACACCGTGGCGTCACTGATCAGGGGTCAGTTTGGTGCTGCGGTCGAGGATTTCCTCATCGTTGACTGCCGTTACCCGTACGAGTACCAAGGAGGACACATCAAGGGAGCCCTGAATCTGTACACCGAGTCTCAGATGCAGCAGGCGGTGCGTCAGGCCTCGGCAGGAGCCCAGCTCTCGCCCGGAAGCGACCCGTCCCCGAGGACGAGGACGAGGGGACGTCCGTCCGACTCACCCCCAGGGGAGGAGGGGTCGTCGCCACGGAAACTGATCATCTTCCACTGCGAGTTCTCCTCGGAAAGAGGCCCACATctGTGTCAGTATCTGAGGAGGCTGGACAGACAGGTCAACGTGTATCCCAGCCTGCACTATCCGGAGCTCTACCTGCTGCTGGGGGGTTACAAACTCTTCCATGCCTCTTACCCGgATCTGTGTGATCCCCGTGGTTACGTGCCCATGCGTCACCGCCAGTACCGGGACCAGCTGCACGGATACCGCAGGACACGGCCGACGCGGCAGAGAAGAcgacggccaatcagagcacaccagAGGACCACACGCTAAATACTACAtgctaaatgtgtgtgtgtgtgtgtatatatatatatatggtatatgtAGTAAACCTAAGTTTATTCAGACACCTTTTGAagctataaaaatgataatacaaTATGAGAAGAACGCGTAGTTAAAGCGTGTCAGGTAATGTTGATAGAAAGGTGTATGTAATGAGTTTGGTTGAATGATCAGCTGATGGGTGCACAACAGATAATAACAGTTGCCAAGCAATGCTTAACTCTGTTCGGTCTGTGGTGTGAAAAGGTCACATCCTCagttaaagaaaaacacttaagCGAAGCACGGTCAGCTCAAAGTGTCTGAATCATTTTTGGTCTCAGTTTTTGTATCAGTTTTACTGGTAGTCCACACTATGAAGAGATTTTGGTTATAATATCACAGTCACAGTTTACTTATTAgtgcaaacatacacaaaatggtgtctgaataaatttgtatgtgtgtgtgtgtgtgtgtgt

Function

NR:

description
PREDICTED: M-phase inducer phosphatase 1-like

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043237777.1 True 2146 mRNA 0.52 12 26722519 26727432
XM_043237783.1 False 2138 mRNA 0.52 12 26722519 26727427

Neighbor

gene id symbol gene type direction distance location
pgam1b pgam1b,pgam1a,pgam1,LOC107700858,LOC107598490,LOC107703810,LOC108258456 coding downstream 690 26718192 ~ 26721829 (-)
exosc1 exosc1,LOC107700859,LOC107598491 coding downstream 4818 26712846 ~ 26717701 (-)
tekt4 tekt4,LOC107729531,LOC107598552,LOC107709630 coding downstream 38046 26680051 ~ 26684473 (-)
wu:fj19g03 NA coding downstream 79275 26639184 ~ 26643244 (-)
pkd1a pkd1,LOC107729871,LOC107700794,LOC107598528 coding downstream 116267 26526890 ~ 26606252 (-)
avpi1 LOC107730030,LOC107700857,LOC107598489,LOC107703811 coding upstream 7040 26734472 ~ 26739040 (-)
crtac1a crtac1a,LOC107700849,LOC107598482,LOC107747162 coding upstream 39854 26767286 ~ 26773820 (-)
LOC122350383 khsrp,LOC107703803,LOC107594262,LOC107700847,LOC107598477 coding upstream 51035 26778467 ~ 26786900 (-)
slc25a23a slc25a23a,LOC107747161,LOC107594260,LOC107703801 coding upstream 59876 26787308 ~ 26798014 (-)
vps54 vps54,LOC107709616,LOC107700845,LOC107598476 coding upstream 75976 26803408 ~ 26819171 (-)
G6827 gprc5b,gprc5bb,LOC107729503,LOC107578286,LOC107700862,LOC107598492,LOC107709629,LOC107703814 non-coding downstream 15691 26653242 ~ 26706828 (-)
G6834 NA non-coding downstream 32029 26689354 ~ 26690490 (-)
G6801 NA non-coding downstream 208599 26513569 ~ 26513920 (-)
G6799 NA non-coding downstream 209561 26512392 ~ 26512958 (-)
G6769 NA non-coding downstream 275781 26444897 ~ 26446738 (-)
G6873 NA non-coding upstream 21291 26748723 ~ 26748956 (-)
G6874 NA non-coding upstream 27300 26754732 ~ 26758292 (-)
G6870 NA non-coding upstream 32572 26760004 ~ 26764480 (-)
G6856 LOC107736226,LOC107598471,LOC107700840 non-coding upstream 82516 26809948 ~ 26865737 (-)
G6887 NA non-coding upstream 205700 26933132 ~ 26942207 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 199117 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 304622 26416859 ~ 26417897 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 587033 26130788 ~ 26135486 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 858732 25831324 ~ 25863787 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 1006815 25714102 ~ 25715704 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 74478 26801910 ~ 26802954 (-)
si:ch211-286b5.5 NA other upstream 190237 26917669 ~ 26920034 (-)
LOC122349164 NA other upstream 257112 26984544 ~ 26992582 (-)
LOC122344379 NA other upstream 468806 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 512892 27240324 ~ 27255067 (-)

Expression


Co-expression Network