pi4k2b (pi4k2b,LOC107742490,LOC107656613,LOC107702326,LOC107750041)


Basic Information

Item Value
gene id pi4k2b
gene name pi4k2b,LOC107742490,LOC107656613,LOC107702326,LOC107750041
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 9252816 ~ 9264070 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238020.1
CAGTGCGCATGCTTGAGAACAGAGGAAGTCGGTAATGGTGACGGATGATGTGGACGAGAAACAGTTGAGAGCATCAGCGAGTCTTCaaggaagaaaacaaaagcctCTTAAAGACGGACTCGCGGATATGAAGCGCGATTTTTGAGAGGTGTCTGAGTTTCTCTGGACGGAGACCGAATACACCCGCGGTCCGCGATGATGGCAGAATGCGATCCCACCGACGGCGAGCCGGAGAAAGGCGGCGGAGATTTAACGTTAACACCGGAGACGAACTTTCTCGCGTCGGAGGTGCCCGCGGTGTTGTTTGAAAAGAGCCGACCGGCGCCGTCGCTAGGACTCTCGCTGAACCCCGGGGCAGCGGTTCGGATCTCGAACTCGACGGAAAGCGTGCTGACGGAGCTGGAAGCGGACGGTTCCGGTGAAGAGGCGCTCCTGTTACCGGGACCTGCCGGAAATCTCTCACCTCGGGCTGGAAGAGAGAAAAGGACGCGGAAGAACAGACACAGCTCGTCGTCTGATAATCTCGCATCTCCAGGTAATAGCAGTGGAGAATTCAACCATTTCCCAGAAGACCCAGAGTTTGCCGAAATTATCCAGAGGGCTGAGCAGGCCATAGAAAATGGCGTCTTTCCCGAACGCATCTCGCAAGGATCCAGTGGAAGCTACTTTGTCAAGGATCCCAAAGGGAAAATCATTGGGGTATTTAAACCAAAATCAGAGGAGCCTTACGGTCACTTAAACCCTAAATGGACCAAATATTTCCATAAAGTCTGCTGCCCATGCTGTTTTGGCCGTGGTTGCCTCATTCCTAACCAGGGCTACCTCTCCGAGGCAGCTGCCTCACTCGTTGACCAAAAACTGGGCCTGGGGATTGTACCCAAAACTAAGGTTGTGAATTTGGCCAGCGAGACTTTTCACTATAGTGCAATCGACCGTGCCAAATCCCGTGGTAAGAAATACGCACTGGAGAAAGTCCCCAAAGTTGGACGACGGTTTCACAGAGTTGGTCTTCCTCCAAAGGTGGGCTCATTTCAGTTGTTTGTGGAGGGCTATCATGAAGCAGACTACTGGCTGAGGAAGTTCGAGGCAGAACCTCTTCCAGAGAACATGAGGAAGCAGCTTCAGTCTCAGTTTGAGAGGCTGGTGGTGCTGGATTACGTCATCAGAAACACAGACAGAGGGAACGATAACTGGTTGATCAAGTATGAGAAGCCGGGCGATGGAGAGCTGACAGAGAAGGAATCTGAATGGACTGACCCTAAAGACTCAGCCATACAGATCGCAGCTATAGATAATGGTTTGGCCTTCCCTTTTAAACACCCCGATGAGTGGAGAGCATACCCATTCCACTGGGCATGGTTGCCTCAGGCCAAAGTGGCCTTTTCCCAGGAGACAAGAGACCTCGTGCTCTCGCGTATTTCTGACATGAACTTTGTGCAGGACCTCTGTGAGGACCTTTATGAGATGTTCAAGACGGATAAGGGGTTTGATAAGACCATGTTTGAGAAACAGATGTCCGTTATGAGAGGACAgATCTTAAACCTGACCCAGGCTTTGAAAGACGGGAGGAGCCCCATCCAGTTAGTGCAGATGCCTCGTGTGGTGGTGGAGAGGAGTCGTGGAGGAGGACAGGGTCGTGTGGTCCAACTGGGCAATGCATTTACCCAGACCTTTCACTGCAAGAGACCCTTTTTCACATCCTGGTAAAACAGCCACACAGAGGGTGAAGACGAAATTGGAAGAGGGTCCTATATGAGAGACACTGGATGAAGAACTTTCTGGAAAGACTTCCCGAGTGAATGTAGCAAAGGGAGAGACTTAAAAAATGCATGGAGGTCGGATGCAGAGGATCCAAGGCCTTTTAATTTCCTGAGCCTTTTCCCCGAATTCTCCTCTTCAGCTTGCTGTGGCTGTCAAGTTGGATCGTCAAAAGGGAATCGTTTCACTGAAGATGATGTTTTTTCGGCGACAGCCTTTCTCAACTGCcaattattttataactatAGATATTATAAATGAAGAATGATGCATAGAACTTAatttaaacttgaaaaatgCTTGAATGTAACTTGcaagtttacattttacacGTCTCCTGAGGACATTTCAACACCAAGAAATACTGGTGACCATGGTATTTAATATGATGAATGTATTTGCTGATTTATGTAACAGGATGCTGGCAACAGTATATACATTGTTAAAGCTGGGTGCTTTGTAAGCCCTaggaaaaaaagtataattacaaaagtttttttttttctctcacacaatCCTGTGATGCATCTTGGACTTTGTATTTCAGCTGAGCAATTGTTAATGTAGagctgtatatttaaaatgaagtgaataaaaaaaaaagaaaaataaagctttgGGGTTGGTATAATA

Function

symbol description
pi4k2b Predicted to enable 1-phosphatidylinositol 4-kinase activity. Acts upstream of or within pectoral fin development. Predicted to be located in cytoplasm and membrane. Predicted to be active in endosome; plasma membrane; and trans-Golgi network. Is expressed in pectoral fin bud. Orthologous to human PI4K2B (phosphatidylinositol 4-kinase type 2 beta).

NR:

description
PREDICTED: phosphatidylinositol 4-kinase type 2-beta isoform X1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004430 1-phosphatidylinositol 4-kinase activity molecular_function

KEGG:

id description
K13711 PI4K2; phosphatidylinositol 4-kinase type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238020.1 True 2391 mRNA 0.47 10 9252816 9264070

Neighbor

gene id symbol gene type direction distance location
hgsnat hgsnat,LOC107565475,LOC107656620,LOC107702325,LOC107562920 coding upstream 646 9237693 ~ 9252170 (+)
itln1 NA coding upstream 15899 9234026 ~ 9236917 (+)
pcdh7a pcdh7a,LOC107742492,LOC107656832,LOC107702324,LOC107750039,LOC107562921,LOC108415078,LOC105908367 coding upstream 22979 9197884 ~ 9229837 (+)
LOC122352717 NA coding upstream 207848 9043497 ~ 9044968 (+)
LOC122350130 fgf20a,fgf20,LOC107747399,LOC107721420,LOC107702330,LOC107657011,LOC107562923,LOC106602193 coding upstream 450192 8800317 ~ 8802624 (+)
tusc3 tusc3,LOC107702329,LOC107731701,LOC107554394,LOC106602198,LOC107391086 coding downstream 369649 9633719 ~ 9694286 (+)
micu3a LOC107747394,LOC107656542,LOC107562929,LOC107721426 coding downstream 506971 9771041 ~ 9794196 (+)
LOC122353673 NA coding downstream 531129 9795199 ~ 9795414 (+)
LOC122353681 NA coding downstream 532144 9796214 ~ 9796429 (+)
LOC122353686 NA coding downstream 533360 9797430 ~ 9797648 (+)
LOC122353659 NA non-coding upstream 190207 9061961 ~ 9062609 (+)
LOC122352814 NA non-coding upstream 199343 9051908 ~ 9053473 (+)
LOC122352408 NA non-coding upstream 220993 9030823 ~ 9031823 (+)
G1979 NA non-coding upstream 510295 8740832 ~ 8742521 (+)
G1977 LOC107758879 non-coding upstream 522422 8730057 ~ 8730394 (+)
G2149 NA non-coding downstream 520148 9784218 ~ 9787161 (+)
G2219 NA non-coding downstream 814815 10078885 ~ 10079470 (+)
G2246 LOC107754123,LOC107562734,LOC107746042,LOC107702337,LOC107558191 non-coding downstream 1108892 10372962 ~ 10373847 (+)
G2350 klhl2,LOC107591556,LOC107745059,LOC107702385,LOC107655955,LOC107750425,LOC107548347 non-coding downstream 1563615 10827685 ~ 10837245 (+)
G2352 NA non-coding downstream 1573555 10837625 ~ 10838465 (+)
G2063 NA other upstream 217216 9035086 ~ 9035600 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other upstream 472652 8762139 ~ 8780164 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other upstream 546943 8700440 ~ 8705873 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other upstream 618417 8623158 ~ 8634399 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other upstream 645031 8606825 ~ 8607785 (+)
G2125 NA other downstream 144335 9408405 ~ 9412437 (+)
G2230 NA other downstream 981087 10245157 ~ 10245578 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other downstream 992592 10256662 ~ 10335202 (+)
G2253 NA other downstream 1133303 10397373 ~ 10398040 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other downstream 1219570 10483640 ~ 10490084 (+)

Expression


Co-expression Network