LOC122344082 (adgre9,LOC107752624,LOC107653768,LOC107558979)


Basic Information

Item Value
gene id LOC122344082
gene name adgre9,LOC107752624,LOC107653768,LOC107558979
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27014477 ~ 27024300 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238097.1
ATGGGACCgtgtttttttatcagtgtcATTGGCTTGTAACGTCTCTATAAATATCACGAAcacaacaatgtttttttagttgAGCACTTATCTGTGACAGTGAGGACCACATCAGGGAAACACGCCCTCTGATCTGCTTTGGATAAAGAGAAATACACCACGCTGTGGAAACTGACAATGGATACATTTCATAAAAtttttataaaaGCACCGCTTACCATCTCTGTTGTTCTGTATGTCTTAACACTTAACTTGGTCTTTGAAGCTGTCACAATGGAAGAGGCAACAGATGCTAGTCTCTCTGTGGACCCCTGCAACAGCTACTCTGTTTTAGACGAACCAAGGAGATCCATCAATAATACAAATTACTTACAATCACCACAAACCTACAACTGTGACACCTCAGTCACCTGGAGCGGCTGGTATCGTCTCTTCATCAATGGTCTAAGCGCTCACATGCCCGAAACGTGTGTTGCAAAGGGTCATTGTGATACTGCTACCACGCTGTGGATTCGTGGTGGACACCCGAAAGTTGAGGATGGAATCGTCACTCGAGATGTCTGCGGTCACTGGGACAATTACTGCTGTTTTTTCTGGTCTTTTCCCATTAAAGTCAAAGCGTGTCCGGGAAGTTATTATGTCTATGAGCTGATTAGTCCGGCTGTGTACTGTTCAGGATACTGTGCAGATGTTAGCAGCATTACCACCAGCTCTACAGCCGTCACACCAGCGAGCCTCTCAAACGCTTATTCCTTCGACCCCTGCTACAACTACAGTGTTCTGGATGATCCATGGAGAGCCAACGGGAGTCAGCCATCAAACATGTGTGACAACTCTCTCAACTGGAGCGGTTGGTATCGTCTCTTCATTAACAATGTGAGCGCACAAATCCCAGACACGTGTGTTAAAAAATTTAGCTGTGGCACCCAAAACCCGCTGGGGATTCGTGGTGGACACCCGACAGTAAAGAATGGAGTCGTCACTCGAGATGTCTGCGGTCAATGGAATAATTACTGCTGCTATTTCGGGTCGTACCCCATTAAAGTCAAAGCCTGTCCAGGACGATATTACGTCTATGAGCTGGTTAGACCAACTTTGTGTGCAGCGTACTGTGCGGTTGTTACTAACATCAGCGCCACTGAGACAACGATGGCACCAGAGACGAGCTCAGATGATTACATCTTTACTGATAATGCGGTTAAAATAATGCTGCTGGGAAGATGCACTACTTCTCTAGAATGTCTTCAACATCTTCTTGAGCAGATTGACAACATTACTGCTCAAGTGCTTTCTTTGGATACTGTGACAGAAATTTTGACTGTGATCTTCAACACTTCAGAGAAGATTCTCGAGTCGTCATCAGCAAGTGATTATGAACTAGCCTTCTTTGGAAACTGTCTGATAAAAACCAGTGAGAAAGTTATTTCTACATTAGTGAAGCCAACAGATACAAGTGACAATGTCAATTTTGCGCTTCCTGCTGTAGAGGTTCAGGTTTTCATGGTTGGACAATGGGTTTCCTTAGAGAAAATCCCTCAACTAAACACAACCAAATCTTCTGCAGAGGTTGATCTCATTGGGATTGCCAAGAACAACTATAAAAGATCAGCTGCTGTGGCTTTCATGAGCTACACTATGATGGAGAATTTTCTGAAGCCAGACTTCTTCAACACATCAAATGACACGATTAAAACCATGCTGTCTACTGTGATCTCAGCTACTCTTCCCAAAACCACCAACACTAAACTCACCAAACCAGTCAACTTCACCCTAAAACACATCAGAGAGTTTGATCCCAGTGGTTCTCTGTCCTGTGTGTACTGGAATATCAGCGAGTGGGTTGTAGATGGTTGTTCTGTTTTAGAGACCAACAGCAGCTTCACTGTGTGTTCCTGTGTTCATCTCTCCACATTCGCCCTCATCATGCAAACCAGCCGTCCACCAGAGAGAGACTCACTGATGGAGCAGTTGAATATGGTGTGTGTGATCGTGGGGCTGGTGTTCTTCAGTCTGGCTCTGTTGACCTTTGCCCTTTGTCAGTGGAGTCCTGGAGTGAATAATGTGGCTCGGATCAACATCTGCATCAGTCTTCTGCTGGCTCACCTTCTGTTTCTGCTCACACAGCAGTTCCTGAAGCTCATACGACCTCAGCAGGAGTTGTGTGCCGTGATCGCAGGCCTTCtgcacttcctctttctctccgcCTTTGTGTGGATGTTCATTGAAGCCGTGCTGCTCTTCATCTGTGTGAAGAACCTATCACAGATCAGCTCCAAAAAGAAGGAGGTGCTTAGCAGTGGATTCCTGTGTGTGATTGGATATGTGGTTTCTCtggttgtggtgtgtgtgtctgtcggTCTGGTTCCTGAAGGATACGGCAGTGAACACTGCTGGATTGAAATAGACAAAGGTTTCATCTGGAGTTTTCTTGGTCCTGTTTGTGTTATACTAgcaCTGAACATGATTCTCTTCATCAGCATCGTCATCATTCTGAAGTCAACTTTCAAAAATCTCAACGCTGAAGTTTCTCAGATGAAACAAACCAAGATTATGGTGTTTAAAACTCTGGCTCAGTTTGTGGTTCTTGGTTGCTCCTGGATTCTGGGTTTCTTCACTAAAGACAGTAAGGTGCTGGAGATCCTCTTCTTGATCTTGAACTCTCAGCAGGGAACCTTCATCTTCCTGATCTACTGTGTCCTCAATCACGAGGTCAGGCAGCAGTACAGGAAGTTCTTTATGTCTTTGCTGTATTAAACAACACTGAGGACTTCAAGGATACAAgagaaacaaaaattatatttcatatgtatatGGTACTTACTTTAAATTGTATGCAAACATAGTTGTTATCAGGAGGACCAGCTTCTGGTCGCCAAGGCAACAAAGACAAATCATCAAGATAAGACAAGccaaattatttaaagagtgtTTACTTCTCACTTAATTCACTAGTAAAAcagatattaaacaaaaaaaataaacatgcatattcTCAAGACCCACTGTTTTGtatattgtcttttttattgtatactGTTTATGTATTGCTTATGACAGAATTTCTAGATAATGTGATCCTTGTTACACAGAGGTGTTTATCACGTCCTCGTAAAACACGCTCGCTATATTGAATGTAAAACTGTCAGTCTAGTTCAGCTGTTCATGCGAATCAGTCGCATTCTGCCTTgaaatgaaaccaaaataaGTCCCTAAATCCCTGGTGTTAAATGAACACTGTAGGTCATTAATGAGGTCATTAAGAGATTCATTTATTGATGGCTGTCCgttattgaagacacctgatgATAACAAGAAGAATCACcagaagaaaatcacaaatttAGTTGCCATTACAGGGATCAGTGTTTACTTTAGTTGGGCCCTTGACCTTATTATATTCTGTAGTGTTTAACTGTTATAACTGAATTATAACAAGCAGACATGTGAAGATGATTATGTCTTGATATGATCCGCATGTAGTGGCCTGAATGAATTCATTAGGATTTGTTTGTATTGTCCTTAATCTAGACAGACATCAAGAATCAGCGTGAGAATCACAGCAACGGTGGCCATCAAAAAGCATGTTGCAGCCAATAAAAACTCCCATCCTGCACtgctgcatgaataaataaatataactgtttgTCACTGTTTTTGAGATACATACACTGATTCTTCATGTTAGCCTAAAAGAACAACCTTtatgaagttgttttttttctccattttgctTGTTATcatcaggtgtcttcaataatAGACAATCATCACTCAATAAATCTCTTAATTATCTCACTAACTTTTAACACTCTGTAGTGTGGACACATATAGACACCCAGCAGGGTTCGTTTAACTCTGGggattttgttgtgtttttaacttaagtttaatttaacagtttcaagtttcagtttcagtttaaCACAATGTAATCATTTGAATGGAAAACCTACAATagtgttaaataatttttttttaaaataaactatggTATCCTTTTTTTCCAGTTGTTTTTTCTCGACCTTCGATAAAAAGCCACCTCTGTTTGGATCGCTCCCAGATAGTCTTACCTTAGATCCTCCCTGAGTGGCTCCTGTAAGAGTTTAAGGGTAATTTGTTGTGATAAAGAACGTAGCAGTCGACATTTACTCCCGACATCTGAGCCGCTGAAGGCGAAGAGAAATAATGTTTAAGTAAACTTGGCTTACACTATCAGAAAAGCCCCCCGTCAACATGTTTGCCCCCCCAAATCTTATCtcaccaaaacattttaagtgcaATGCATAGTTTTTCCTGTTAACTATAGCCGCTATAAATTCACATCTGCGTTATTGTCGCTacactgaaatgaaattttTCTTTGCTCTGTTTCTGTACAGTGAAGATGTTATAATTAGTAACCTACAGTGTGTTTTATTCAATTCACGTTAAATACAgtcatattcaaaatattttatggcATGACACATTTTGGTCCTTAAGTAAAGCCTTAAGTTAATAGATACTATAAGGCTACTTT

Function

symbol description
adgre9 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in testis.

NR:

description
PREDICTED: adhesion G protein-coupled receptor E1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238097.1 True 4519 mRNA 0.41 20 27014477 27024300

Neighbor

gene id symbol gene type direction distance location
LOC122349409 NA coding downstream 30890 26980305 ~ 26983587 (-)
si:ch211-286b5.4 LOC107709606,LOC107703789,LOC107594247 coding downstream 96862 26912603 ~ 26917615 (-)
nanos3 NA coding downstream 102661 26911058 ~ 26911816 (-)
cc2d1a cc2d1a,LOC107747148,LOC107594251,LOC107598465 coding downstream 107465 26893812 ~ 26907012 (-)
mri1 mri1,LOC107700835,LOC107594353,LOC107703717,LOC107598470 coding downstream 123195 26879067 ~ 26891282 (-)
dnajb1b dnajb1b,LOC107573606,LOC107694604,LOC107747146,LOC107703757,LOC107594241 coding upstream 27427 27051727 ~ 27054595 (-)
ndufb7 ndufb7,LOC107573602,LOC107694602,LOC107703772,LOC107594238,LOC107714119 coding upstream 41858 27066158 ~ 27067828 (-)
zgc:136908 zgc:136908,LOC107594236,LOC107703743,LOC108442223,LOC102292797,LOC101483411 coding upstream 44374 27068674 ~ 27076809 (-)
samd1b samd1,LOC107580959,LOC107728687,LOC107599303,LOC108442215,LOC107661838 coding upstream 54199 27078499 ~ 27085950 (-)
prkacab prkacab,prkaca,LOC107694605,LOC107703755 coding upstream 63243 27087543 ~ 27097079 (-)
G6933 adgre9,LOC107747176,LOC107694597,LOC107752408,LOC107752624 non-coding downstream 2106 27012123 ~ 27012371 (-)
G6929 NA non-coding downstream 4925 27009156 ~ 27009552 (-)
G6927 NA non-coding downstream 6490 27007503 ~ 27007987 (-)
G6926 NA non-coding downstream 7334 27006647 ~ 27007143 (-)
G6923 NA non-coding downstream 19778 26994438 ~ 26994699 (-)
G6949 NA non-coding upstream 39844 27064144 ~ 27091429 (-)
G6981 NA non-coding upstream 272875 27297175 ~ 27297611 (-)
G6957 NA non-coding upstream 275126 27299426 ~ 27321856 (-)
G6982 NA non-coding upstream 277506 27301806 ~ 27302275 (-)
G6983 NA non-coding upstream 278800 27303100 ~ 27305694 (-)
LOC122349164 NA other downstream 21895 26984544 ~ 26992582 (-)
si:ch211-286b5.5 NA other downstream 94443 26917669 ~ 26920034 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 211523 26801910 ~ 26802954 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 491075 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 596580 26416859 ~ 26417897 (-)
LOC122344379 NA other upstream 171938 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 216024 27240324 ~ 27255067 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other upstream 351017 27375317 ~ 27385079 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other upstream 730482 27754782 ~ 27939452 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other upstream 867601 27891901 ~ 28076645 (-)

Expression


Co-expression Network