LOC122344130


Basic Information

Item Value
gene id LOC122344130
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27438436 ~ 27441762 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238101.1
GATCTGTTTTTCACCTCTGTTCGATATTAGGTTATTAGAGTTATGCTTGAACAGAtgacaaacagaaaatgaaagtttttgtctttcttcGATTGGGATTGGGTGAATTTTTTGGGACATTTTGCTCTGTTTTGACTGGATTAAGGAaatGTGATTCAaaggagctgaggattgtgttGCTGGGAGTTTCTGGAGCTGGAAAGAGTTCAACGGGAAATGCAATACTGGGCCGAGAGGCGTTTAAAGAGAACAGAaccagagagagtgagaaacagAGAGGAAGAGTAGAAGACAGAAACATCTCCATCATCGACACGCCAGGATTCTTCAACACTGACCTGACTGATGATGAGATGAAGAATGAACTGATGAAGAGTATGTACCTCTGTTATCCTGGTCCTCACTTGTTCCTGCTCGTCATCAACCTGGAGAACTTCAGAGAGGAGCAGAGGAACATTGTGGAGCAAATTCAGGAGACCTTTGCAGAAGAAGCTCTGAGGTTCACAGTAGTGCTGTTTGTTGGACGAGAAAAAATTCCAAACAGAAAATGGAAACTCCTTAGGGATAGCAGGAAGTTTCAGGATCTAGTCAATCACTGCAGAGGACAGTATCATGTAATCAACAGTAAAAGTGACATTATTCCAACCCACATCACAAATCTTCTAAAGACGATCAATGACATCATCGCACAGAATGACGGCCAGCATTACGACATTCACTTTTTCTTAAGAATGCCAATAAAgagtagaaaagaaaagataaaacaagaaaaaaaaaaggaagagaaaatCCATACAGTGCGGGAGGTTATTCACATGCACAGTGTAATAGAAGAAAGCACAATAAATGTGACTGAACAGAAAGATTTTAGTTCTCATGGGACAAATATGGAGAGAACTGGATTTTATGTGGATAGATGGTCTAGAGTTCCACCTGAAATGAAGAATAACGAAGAAGAGGTGGtcaaacaatcagaaaaaaaaatctttaaacagaAGGAAGAAACGAATACAGtgataaaaccaaacaaatgcTGGAAAGCAAGTGAAATGAGAAAATGGGATCAGAAGGAGCAGCAGACGGAGACAGAACATCATCAAACCCAAGCAGtcTCAGTCTCAGAGTCCATACAGAGCAGACACACAAGGATCGTGATGCTGGGGAAAACTGGAGCTGGAAAGAGCGCAACAGGAAACACTTTCCTGGGAAAGAAAGCGTTTAAAGAAGAACTTTCTTCTGAATCTGTGACTATGAAATGCCAACAACATCGGCAGACAGTAGAAGGTCGAATCATCTCAGTGACCGACACTCCAGGACTGTTTGATACGACAATCAATGAAGAACAACTGAAGAAGGAATTAGAGAAGTGTATAGAAATGTCTGTTCCTGGTCCTCATGCGTTTCTGCTGGTCATCAGACTGGATGTGAAATTCACAGTCGAGGAGAAAAACACAGTGAAATGGATCGAGGAGAACTTTGGAGAACAAGCTACACGTTACACCATCATTCTGTTCACCAGAGGAGATCAGTTAGAAATATCCATCGAGGAGTTTCTCTCCAAAAACAAGCAGATTAGAGAGCTAGTTAGACAGTGTAAAGGAggttatcatgtttttaacaACAAGGATGAAGAAAATCAATCACAGGTCACCGAACTGATAGAGAAGATAGACAGAATGGTGATGGAGAACGGAGGAGAGCATTACACAAATGATATGTACCAGGAAGCTCAGAGGAGAATAGAGGAAGAAGAGATGAGgaggagagaagaagaagagagaagcaGGTTGGAAGAGGAGGAAAGGATAAGGAAAGAGGAAAGATGCAGGCTGTTGAATCATGCTAAAGTCTTAATGGGAACAGGTGTGATAGTGGGCGCAGGAGCAGCGGTCGTAGTTGGTGGAGGGACTCTTAGTCCAGCGGTAATCTCAGGAGCAGCACTTGCTGGATCTGCAGCCGTGGCCTCAGCTGCTAAAGGAGCGACGCTCTCCGAGGCTTTAATGGCAGGAGCTGTAGCCGCTGGAAATGCAGCTCTGAGCTCTGTTACCCGCGGAGCGTCACTGCCTGCGGCTTTAATGGGAGGGAGGAGCGAGGAACCGAGTTTCAGTTAAAGCAATTGTTTTTCCTCGGACTATCATTTCGTAATAATTCTAACGCTACAAACGCAGCTAATGATGAGTAATGAAGTTTGTCTCTGATTATTGTGCTGTGGGATGTGTTTCctgtacatttatttgtttgcggCGACCTGCCACAATATCAAAACTGACGATTTTCCAAACGGCTTCGTTGAATAAACAAACCGAGGCGTGcgtgttttta
>XM_043238102.1
TGGCATTGTTTTAGAGTTTGAGGAAGAGTAGACACACCTCCCGTGTCGTGGGATCCACAGAGAAATACAGAGCGACTTTGAaaggcaaaaacaaacacataatgGCATCGGCACATCAAGGTGATTCAaaggagctgaggattgtgttGCTGGGAGTTTCTGGAGCTGGAAAGAGTTCAACGGGAAATGCAATACTGGGCCGAGAGGCGTTTAAAGAGAACAGAaccagagagagtgagaaacagAGAGGAAGAGTAGAAGACAGAAACATCTCCATCATCGACACGCCAGGATTCTTCAACACTGACCTGACTGATGATGAGATGAAGAATGAACTGATGAAGAGTATGTACCTCTGTTATCCTGGTCCTCACTTGTTCCTGCTCGTCATCAACCTGGAGAACTTCAGAGAGGAGCAGAGGAACATTGTGGAGCAAATTCAGGAGACCTTTGCAGAAGAAGCTCTGAGGTTCACAGTAGTGCTGTTTGTTGGACGAGAAAAAATTCCAAACAGAAAATGGAAACTCCTTAGGGATAGCAGGAAGTTTCAGGATCTAGTCAATCACTGCAGAGGACAGTATCATGTAATCAACAGTAAAAGTGACATTATTCCAACCCACATCACAAATCTTCTAAAGACGATCAATGACATCATCGCACAGAATGACGGCCAGCATTACGACATTCACTTTTTCTTAAGAATGCCAATAAAgagtagaaaagaaaagataaaacaagaaaaaaaaaaggaagagaaaatCCATACAGTGCGGGAGGTTATTCACATGCACAGTGTAATAGAAGAAAGCACAATAAATGTGACTGAACAGAAAGATTTTAGTTCTCATGGGACAAATATGGAGAGAACTGGATTTTATGTGGATAGATGGTCTAGAGTTCCACCTGAAATGAAGAATAACGAAGAAGAGGTGGtcaaacaatcagaaaaaaaaatctttaaacagaAGGAAGAAACGAATACAGtgataaaaccaaacaaatgcTGGAAAGCAAGTGAAATGAGAAAATGGGATCAGAAGGAGCAGCAGACGGAGACAGAACATCATCAAACCCAAGCAGtcTCAGTCTCAGAGTCCATACAGAGCAGACACACAAGGATCGTGATGCTGGGGAAAACTGGAGCTGGAAAGAGCGCAACAGGAAACACTTTCCTGGGAAAGAAAGCGTTTAAAGAAGAACTTTCTTCTGAATCTGTGACTATGAAATGCCAACAACATCGGCAGACAGTAGAAGGTCGAATCATCTCAGTGACCGACACTCCAGGACTGTTTGATACGACAATCAATGAAGAACAACTGAAGAAGGAATTAGAGAAGTGTATAGAAATGTCTGTTCCTGGTCCTCATGCGTTTCTGCTGGTCATCAGACTGGATGTGAAATTCACAGTCGAGGAGAAAAACACAGTGAAATGGATCGAGGAGAACTTTGGAGAACAAGCTACACGTTACACCATCATTCTGTTCACCAGAGGAGATCAGTTAGAAATATCCATCGAGGAGTTTCTCTCCAAAAACAAGCAGATTAGAGAGCTAGTTAGACAGTGTAAAGGAggttatcatgtttttaacaACAAGGATGAAGAAAATCAATCACAGGTCACCGAACTGATAGAGAAGATAGACAGAATGGTGATGGAGAACGGAGGAGAGCATTACACAAATGATATGTACCAGGAAGCTCAGAGGAGAATAGAGGAAGAAGAGATGAGgaggagagaagaagaagagagaagcaGGTTGGAAGAGGAGGAAAGGATAAGGAAAGAGGAAAGATGCAGGCTGTTGAATCATGCTAAAGTCTTAATGGGAACAGGTGTGATAGTGGGCGCAGGAGCAGCGGTCGTAGTTGGTGGAGGGACTCTTAGTCCAGCGGTAATCTCAGGAGCAGCACTTGCTGGATCTGCAGCCGTGGCCTCAGCTGCTAAAGGAGCGACGCTCTCCGAGGCTTTAATGGCAGGAGCTGTAGCCGCTGGAAATGCAGCTCTGAGCTCTGTTACCCGCGGAGCGTCACTGCCTGCGGCTTTAATGGGAGGGAGGAGCGAGGAACCGAGTTTCAGTTAAAGCAATTGTTTTTCCTCGGACTATCATTTCGTAATAATTCTAACGCTACAAACGCAGCTAATGATGAGTAATGAAGTTTGTCTCTGATTATTGTGCTGTGGGATGTGTTTCctgtacatttatttgtttgcggCGACCTGCCACAATATCAAAACTGACGATTTTCCAAACGGCTTCGTTGAATAAACAAACCGAGGCGTGcgtgttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238101.1 True 2322 mRNA 0.43 3 27438436 27441000
XM_043238102.1 False 2292 mRNA 0.43 3 27438436 27441762

Neighbor

gene id symbol gene type direction distance location
LOC122344204 NA coding downstream 157 27431730 ~ 27438279 (-)
LOC122349201 NA coding downstream 12289 27422954 ~ 27426147 (-)
LOC122344221 LOC107574524,LOC107578363,LOC107574523,LOC107576205 coding downstream 16714 27417953 ~ 27421722 (-)
LOC122344156 LOC107578363,LOC107574523,LOC107576205 coding downstream 44558 27379998 ~ 27393878 (-)
dennd1c LOC107694614,LOC107594230,LOC107747169,LOC108258416,LOC107572265 coding downstream 149115 27280301 ~ 27289321 (-)
gcgrb gcgrb,LOC107747136,LOC107572112,LOC107698219,LOC107712052,LOC107569281 coding upstream 162416 27604178 ~ 27633774 (-)
si:dkey-27j5.5 si:dkey-27j5.5,LOC107707713,LOC107659763,LOC107571882 coding upstream 282416 27724178 ~ 27726902 (-)
LOC122352823 NA coding upstream 317456 27759218 ~ 27765006 (-)
LOC122352815 NA coding upstream 352708 27794470 ~ 27803049 (-)
LOC122349272 NA coding upstream 446057 27887819 ~ 27890576 (-)
G6961 NA non-coding downstream 109109 27316372 ~ 27329327 (-)
G6957 NA non-coding downstream 116580 27299426 ~ 27321856 (-)
G6996 NA non-coding upstream 3709 27445471 ~ 27448558 (-)
G7000 NA non-coding upstream 56132 27497894 ~ 27498743 (-)
G7009 NA non-coding upstream 149611 27591373 ~ 27592450 (-)
G7010 NA non-coding upstream 151959 27593721 ~ 27595844 (-)
G7012 NA non-coding upstream 204261 27646023 ~ 27646725 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 53357 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 183369 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 235808 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 445854 26984544 ~ 26992582 (-)
si:ch211-286b5.5 NA other downstream 518402 26917669 ~ 26920034 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other upstream 313020 27754782 ~ 27939452 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other upstream 450139 27891901 ~ 28076645 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 779137 28220899 ~ 28223247 (-)
G7475 NA other upstream 802366 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 949277 28391039 ~ 28392053 (-)

Expression


Co-expression Network