LOC122344560 (LOC107714107,LOC107698215,LOC107752624,LOC107653768,LOC107703693,LOC107558979)


Basic Information

Item Value
gene id LOC122344560
gene name LOC107714107,LOC107698215,LOC107752624,LOC107653768,LOC107703693,LOC107558979
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27152145 ~ 27156249 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238132.1
TCtggttgtggtgtgtgtgtctgtcggTCTGGTTCCTGAAGGATACGGCAGTGAACACTGCTGGATTGAAATAGACAAAGGTTTCATCTGGAGTTTTCTTGGTCCTGTTTGTGTTATACTAgcaCTGAACATGATTCTCTTCATCAGCATCGTCATCATTCTGAAGTCAACTTTCAAAAATCTCAACGCTGAAGTTTCTCAGATGAAACAAACCAAGATTATGGTGTTTAAAACTCTGGCTCAGTTTGTGGTTCTTGGTTGCTCCTGGATTCTGGGTTTCTTCACTAAAGACAGTAAGGTGCTGGAGATCCTCTTCTTGATCTTGAACTCTCAGCAGGGAACCTTCATCTTCCTGATCTACTGTGTCCTCAATCACGAGGTCAGGCAGCAGTACAGGAAGTTCTTTATGTCTTTGCTGTATTAAACAACACTGAGGACTTCAAGGATACAAgagaaacaaaaattatatttcatatgtatatGGTACTTACTTTAAATTGTATGCAAACATAGTTGTTATCAGGAGGACCAGCTTCTGGTCGCCAAGGCAACAAAGACAAATCATCAAGATAAGACAAGccaaattatttaaagagtgtTTACTTCTCACTTAATTCACTAGTAAAAcagatattaaacaaaaaaaataaacatgcatattcTCAAGACCCACTGTTTTGtatattgtcttttttattgtatactGTTTATGTATTGCTTATGACAGAATTTCTAGATAATGTGATCCTTGTTACACAGAGGTGTTTATCACGTCCTCGTAAAACACGCTCGCTATATTGAATGTAAAACTGTCAGTCTAGTTCAGCTGTTCATGCGAATCAGTCGCATTCTGCCTTgaaatgaaaccaaaataaGTCCCTAAATCCCTGGTGTTAAATGAACACTGTAGGTCATTAATGAGGTCATTAAGAGATTCATTTATTGATGGCTGTCCgttattgaagacacctgatgATAACAAGAAGAATCACcagaagaaaatcacaaatttAGTTGCCATTACAGGGATCAGTGTTTACTTTAGTTGGGCCCTTGACCTTATTATATTCTGTAGTGTTTAACTGTTATAACTGAATTATAACAAGCAGACATGTGAAGATGATTATGTCTTGATATGATCCGCATGTAGTGGCCTGAATGAATTCATTAGGATTTGTTTGTATTGTCCTTAATCTAGACAGACATCAAGAATCAGCGTGAGAATCACAGCAACGGTGGCCATCAAAAAGCATGTTGCAGCCAATAAAAACTCCCATCCTGCACtgctgcatgaataaataaatataactgtttgTCACTGTTTTTGAGATACATACACTGATTCTTCATGTTAGCCTAAAAGAACAACCTTtatgaagttgttttttttctccattttgctTGTTATcatcaggtgtcttcaataatAGACAATCATCACTCAATAAATCTCTTAATTATCTCACTAACTTTTAACACTCTGTAGTGTGGACACATATAGACACCCAGCAGGGTTCGTTTAACTCTGGggattttgttgtgtttttaacttaagtttaatttaacagtttcaagtttcagtttcagtttaaCACAATGTAATCATTTGAATGGAAAACCTACAATagtgttaaataatttttttttaaaataaactatggTATCCTTTTTTTCCAGTTGTTTTTTCTCGACCTTCGATAAAAAGCCACCTCTGTTTGGATCGCTCCCAGATAGTCTTACCTTAGATCCTCCCTGAGTGGCTCCTGTAAGAGTTTAAGGGTAATTTGTTGTGATAAAGAACGTAGCAGTCGACATTTACTCCCGACATCTGAGCCGCTGAAGGCGAAGAGAAATAATGTTTAAGTAAACTTGGCTTACACTATCAGAAAAGCCCCCCGTCAACATGTTTGCCCCCCCAAATCTTATCtcaccaaaacattttaagtgcaATGCATAGTTTTTCCTGTTAACTATAGCCGCTATAAATTCACATCTGCGTTATTGTCGCTacactgaaatgaaattttTCTTTGCTCTGTTTCTGTACAGTGAAGATGTTATAATTAGTAACCTACAGTGTGTTTTATTCAATTCACGTTAAATACAgtcatattcaaaatattttatggcATGACACATTTTGGTCCTTAAGTAAAGCCTTAAGTTAATAGATACTATAAGGCTACTTTGCCCCAAATATTACATATTGGATTTTAAAGGGAGAGCAGCCCTATAAATACCTGTCCGTGTCATTAACGTTAATCAAACCtcaaagatattaaataaatgtgtaggCTACCTGTTAAATACACCTTTTGAAAAACTAGTTAATTGATTGATTCAGTTTTTTACTGTACGAATGACATTACACTTCAGCAGTACACAACAAAATCCTTAGTTTCAAATGAACACTTCCAGGTGTCTATATGTGTCCACACTACAGAGTGTTAAAGTTAATGAGGTAATTAAGAGATTCATTGAGTGATGGTTGTCCgttattgaagacacctgatgTTAACAAGAAGAATTATCTTTTAGTTGCCATTACTGTGGTCAGCTTTTactttagttgggctcttgacccttgattttatattaacatgtaGCGTTTGGCTGCTATAACTGAATTATAACAATCAGACAAAAGAAGAGCAAAAGTAATTGTGTGGAGAGGATTACGTTTTGGTCCAATCATCATGTAGTGACCTGAACAAATTAGTTTGGATTTGTTAGTTGTCAACACGGTGTTTACGAAActtattttgatcaaaaactTGTTCTTAATTGTCCACGCAGACATCGAGAATCAAAACTCATCCATGGCTCCCATCCTGCATTGCtgcatgaataaacaaatacatctgTTTGTCTGATTATGCTGCTTATCACATTCTTAAGATACACACACTGATATCTGTGTGTGCCTAAAAAGACAAGCTTTCTGAAGTAGTGACGTTTTTTTGAGGAATCAAAATATTGTCTTAATCAATGACGAAGATGTAACTTtgagaaactttaaaaatagattCAGTGGTTCGGTGGATTATTGCttatgttagaatgatttcataACCCATGATTTCTGGCTGGTGGCATAGCGTGATCATTGCAGTAAAACAATACGTAATATTATGAAGTCAAGGGTCAAGAGCCCAGCTGAAGTAAACACTGATCACTGTAAtgataaaatttagattttcttcTTTGGTGATTCTGCTTGTTAATCAGGTGTCTATAATAAGAGATAATCGTCACTCAATGAATCTTTTAATTACCTCATTAACTTTAACACTGCtttagtgtacattttaaacactctgTAGCATGGACACATATAGACACCTGGAAGAGTTCATTTAACACCGGTACTGTTTATCCCGAACATGATGCTGTAGTCCTCAGTGTTGTTTACTACAGCAAAGACATCTCAAGAACTTCCTGTACTGC

Function

NR:

description
PREDICTED: adhesion G protein-coupled receptor E3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238132.1 True 3447 mRNA 0.36 5 27152145 27156249

Neighbor

gene id symbol gene type direction distance location
LOC122344544 NA coding downstream 27423 27123332 ~ 27124722 (-)
LOC122344512 NA coding downstream 34543 27115481 ~ 27117602 (-)
LOC122344431 NA coding downstream 46797 27103889 ~ 27105348 (-)
asf1bb asf1bb coding downstream 48885 27098906 ~ 27103260 (-)
prkacab prkacab,prkaca,LOC107694605,LOC107703755 coding downstream 55066 27087543 ~ 27097079 (-)
LOC122344447 asf1bb,asf1b,LOC107747137,LOC107573603,LOC107703766,LOC107694608,LOC101069596 coding upstream 24478 27180727 ~ 27185902 (-)
LOC122344496 NA coding upstream 29970 27186219 ~ 27187729 (-)
LOC122344463 NA coding upstream 37840 27194089 ~ 27196061 (-)
c3a.4 c3a.4,LOC107749249,LOC107747139,LOC107703775,LOC107594303,LOC107572266 coding upstream 52310 27208559 ~ 27223761 (-)
c3a.6 c3a.6,LOC107703739,LOC107594231,LOC107749254 coding upstream 67656 27223905 ~ 27238733 (-)
G6949 NA non-coding downstream 60716 27064144 ~ 27091429 (-)
G6933 adgre9,LOC107747176,LOC107694597,LOC107752408,LOC107752624 non-coding downstream 139774 27012123 ~ 27012371 (-)
G6929 NA non-coding downstream 142593 27009156 ~ 27009552 (-)
G6927 NA non-coding downstream 144158 27007503 ~ 27007987 (-)
G6926 NA non-coding downstream 145002 27006647 ~ 27007143 (-)
G6981 NA non-coding upstream 140926 27297175 ~ 27297611 (-)
G6957 NA non-coding upstream 143177 27299426 ~ 27321856 (-)
G6982 NA non-coding upstream 145557 27301806 ~ 27302275 (-)
G6983 NA non-coding upstream 146851 27303100 ~ 27305694 (-)
G6956 NA non-coding upstream 156694 27312943 ~ 27314514 (-)
LOC122349164 NA other downstream 159563 26984544 ~ 26992582 (-)
si:ch211-286b5.5 NA other downstream 232111 26917669 ~ 26920034 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 349191 26801910 ~ 26802954 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 628743 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 734248 26416859 ~ 26417897 (-)
LOC122344379 NA other upstream 39989 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 84075 27240324 ~ 27255067 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other upstream 219068 27375317 ~ 27385079 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other upstream 598533 27754782 ~ 27939452 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other upstream 735652 27891901 ~ 28076645 (-)

Expression


Co-expression Network