zgc:174945


Basic Information

Item Value
gene id zgc:174945
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7134391 ~ 7135608 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238266.1
GTTCTGCATTTAAGACTTTGTTCCTTCAACTGACCAGCTTAAAGCTTTGAAACAGCACTTTGTTACATCGTTTTCAGCAGGCATGTGATCTGTGTCTCGTCTGTCTCAGATGATGCACTGGTGTTGCATCTGCAAAGATCAAAGGAAGTCATCTTCATGTAATAGCGCTTCAGACACATGTTAGGTAGCCAACTTCAAGTTAGCCGTTTCCTCTGACTGACTGCGCACAAAAACATGCAGCTCTTTCACCCGACAACCGCCTTTCTCGTATTTGTTCTCTGCAGTGAGCTAAAATCTCTAGCGATGGTGGTTGTGAAATACCCGCGTGAACCGGTAACCAAGGCCGAAGGTCTTTCGATGTCTCTCATGTGCACAGTGGAGTATGAAAGAGAGGACTGCGACATCGAGGCCAAATGGTGGTATACAAACAGCACTGAGCTTTTGCCCATCATGGATCCAAACGCATTTCTAATCAcagtaaatgaaacaaaaacaaatgagttGAGGCTGAGGAAAATTTCCCTGACCATCAGATCCCTGAAGCTTCAGGACAGTGGCCTCTACCAGTGTGATGCCAAATGTCTCAACAGTGGGACTCAAGCGAAAGGCCATCTTGTGAATGTCACCGTCACAGCTGATCCATACAAAGGTATGAAGGTCTCGACATGGAGCGGCCAGTTAAAGGCAGATGCGGCTGCGCTAATATGTAGcgccatattattattattaagatgttATTAAATGACATTGTTTTCAGTAATACAGGTGTCAATATATGAACCGCTCTGCTGTTAATCTGCTAGTGTGACCatctgtaataatttttttgaattcTTGACTTGGTCTTGAATTATGTTCTCATGACAATATGTACCTAATAATTTGTCATGGGCTAGATTTGGTTGCCTGatgttgtatttttgttctttattttctttgttgcCATAAATTGCTACACTGCTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238266.1 True 965 mRNA 0.42 3 7134391 7135608

Neighbor

gene id symbol gene type direction distance location
cnpy3 tnrc5,LOC107758855,LOC107590778,LOC107723163,LOC107665936,LOC107565448,LOC107692718 coding downstream 64814 7065125 ~ 7069577 (-)
LOC122351948 LOC107758836,LOC107692686,LOC107723162,LOC107665933,LOC107565093,LOC107590751,LOC557811 coding downstream 115355 7008598 ~ 7019036 (-)
LOC122351719 fga,LOC107692636,LOC107714149,LOC107565125,LOC107714150,LOC107758872 coding downstream 288935 6839928 ~ 6845456 (-)
rnf175 rnf175,LOC107714147,LOC107692639,LOC107564352,LOC107665971 coding downstream 300309 6828520 ~ 6834082 (-)
pgap6 tmem8a,LOC107714144,LOC107692641,LOC107564383,LOC107722960,LOC107590745,LOC107663323 coding downstream 342522 6782533 ~ 6791869 (-)
LOC122344706 LOC107565429,LOC107590752,LOC107692683 coding upstream 152 7135760 ~ 7138480 (-)
LOC122344694 LOC107723159,LOC107565429,LOC107723172,LOC107665982,LOC107758876,LOC107590752,LOC107692684 coding upstream 5725 7141333 ~ 7143853 (-)
cfap221 cfap221,LOC107758838 coding upstream 51958 7187566 ~ 7196661 (-)
crfb15 LOC107692625,LOC107723179,LOC107758857 coding upstream 61925 7197533 ~ 7203087 (-)
knl1 casc5 coding upstream 164340 7299948 ~ 7311221 (-)
G1553 NA non-coding downstream 130690 6982959 ~ 7003701 (-)
G1544 NA non-coding downstream 131403 6958686 ~ 7002988 (-)
G1532 NA non-coding downstream 274125 6859889 ~ 6860266 (-)
G1531 NA non-coding downstream 276330 6857795 ~ 6858061 (-)
G1529 NA non-coding downstream 278283 6855795 ~ 6856108 (-)
G1632 NA non-coding upstream 14677 7150285 ~ 7152480 (-)
LOC122341717 NA non-coding upstream 161886 7297494 ~ 7298145 (-)
G1660 knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 non-coding upstream 176644 7312252 ~ 7312898 (-)
G1663 NA non-coding upstream 180302 7315910 ~ 7316318 (-)
G1781 NA non-coding upstream 520470 7656078 ~ 7660532 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 109 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 589833 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 666137 6456044 ~ 6468254 (-)
gng13a NA other downstream 806050 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 859640 6267663 ~ 6274751 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 68396 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 1356536 8492144 ~ 8500212 (-)
G1926 NA other upstream 1420432 8556040 ~ 8607795 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 1643604 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 3221573 10357181 ~ 10401686 (-)

Expression


Co-expression Network